Definition | Streptococcus pneumoniae D39, complete genome. |
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Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116515422
Identifier: 116515422
GI number: 116515422
Start: 894614
End: 894754
Strand: Direct
Name: 116515422
Synonym: SPD_0882
Alternate gene names: NA
Gene position: 894614-894754 (Clockwise)
Preceding gene: 116516500
Following gene: 116516489
Centisome position: 43.72
GC content: 36.17
Gene sequence:
>141_bases TTGGTTGCAGGTCTAACAAATGGTGAATTAATCGCTCCAATGACTTACGAAGAGATGATGACGAGCGACTTTTTTGAAGT ATGGTTTCAGAAGTTTTTCTTACCAACATTAACCACACCATCGGTTATTATAGTAAAATGA
Upstream 100 bases:
>100_bases AACAGGATTCGATACTTATTTTTATCGAGAATATGGTCGCTCATTAAAAGGTCAGTTAAGAAGAGGCAAAGTATCTGGAA GAAGATATCAGAGGATTTCT
Downstream 100 bases:
>100_bases AATAAGAATAGGACAAATCGATCAGGACAGTAAAATCGAATTCTAACAATGTTTTAGAAGTCCATATGTACTATTCTAGT TTCAATATACCATAACTGTT
Product: IS630-Spn1, transposase Orf2, truncation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MVAGLTNGELIAPMTYEEMMTSDFFEVWFQKFFLPTLTTPSVIIVK
Sequences:
>Translated_46_residues MVAGLTNGELIAPMTYEEMMTSDFFEVWFQKFFLPTLTTPSVIIVK >Mature_46_residues MVAGLTNGELIAPMTYEEMMTSDFFEVWFQKFFLPTLTTPSVIIVK
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5275; Mature: 5275
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.7 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.7 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAGLTNGELIAPMTYEEMMTSDFFEVWFQKFFLPTLTTPSVIIVK CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MVAGLTNGELIAPMTYEEMMTSDFFEVWFQKFFLPTLTTPSVIIVK CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA