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The map label for this gene is yteP [H]

Identifier: 116515415

GI number: 116515415

Start: 87807

End: 88736

Strand: Direct

Name: yteP [H]

Synonym: SPD_0088

Alternate gene names: 116515415

Gene position: 87807-88736 (Clockwise)

Preceding gene: 116516464

Following gene: 116516742

Centisome position: 4.29

GC content: 41.29

Gene sequence:

>930_bases
ATGAAAAAGTTTTCAAAAACATTGAGAGACAACTGGATCTTTCTCTTGATGGTTTTGCCAGGGGCACTCTGGTTGATTCT
ATTCTTTTACATTCCAGTATTTGGGAACGTGGTTGCCTTCAAAGACTACCACATGACCAGTAATGGTTTCATAGATAGTA
TCATAAATAGTAAATGGGTCGGACTCGATAATTTCAGATTCTTATTTAGTTCAAGAGACGCCTTTATTATCACACGAAAT
ACTGTCCTCTACAATCTTGGCTTTATCTTTCTAGGTTTAGTTGTATCTGTAGGGATTGCCATTATCCTCAGCGAGCTCCG
TTCTAAGAGAATGGTGAAGATTTTTCAAACTTCTATGTTGTTCCCTTACTTCTTGTCTTGGGTTATCATTAGTTTCTTTA
CAGATGCCTTCCTAAATATTGATAAAGGGGTGTTCAATCATCTATTGGAAAGTCTTGGTCTCAAAGAAGTCAATTTCTAC
GCTGACCTGGGCATCTGGCCCTATCTCCTACTTTTCCTAGGTATTTGGAAAGGCTTTGGATATAGCAGTGTCATGTACTA
TGCGACGATCATGGGAATTGATCCAACCTACTACGAAGCAGCGACAGTGGACGGAGCTAGCAAGTGGCAACGTATTCGCA
ACGTAACCATTCCTCAGTTGACTCCGCTTGTAACTGTATTGACCATCCTTGCAGTCGGAAATATCTTCCGCGCAGACTTC
GGTCTCTTCTATCAAATCCCACACAATGCTGGTCAGCTTTACAATGTAACCAACGTTTTGGACGTATATGTCTTTAATGG
TTTGACTCAGACAGCAGATATCGGTATGGCTGCAGCAGCCGGTCTTTACCAATCCGTTGTTGGTTTGATTCTGGTTATCC
TATCAAACTTGCTTGCAAGACGAGTCGATCCAAACTCAGCTTTGTTCTAG

Upstream 100 bases:

>100_bases
TAACCTAACCTGCAAATAGGAGTATACTAATAATGTAATCGTTATCAAAAGTCTAAAAAAGAATTTTTAGATGGATATCA
AAATAAAAAGGGAGGAAATT

Downstream 100 bases:

>100_bases
AAAGGAGGAGAATATGGCAAAAAAGAAAATTAAAAAAGAAAAAATTGATAATGTCGGCATTCACTCCTTCAGTAAGAAAG
CAGATATCTTCTTCAGTATC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRN
TVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFY
ADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADF
GLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF

Sequences:

>Translated_309_residues
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRN
TVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFY
ADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADF
GLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>Mature_309_residues
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRN
TVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFY
ADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADF
GLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane. May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG4209

COG function: function code G; ABC-type polysaccharide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=305, Percent_Identity=26.5573770491803, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=27.843137254902, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34979; Mature: 34979

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWV
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCCC
GLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSML
CCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCC
YSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADF
HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
GLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLAR
CEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDPNSALF
CCCCCCCCC
>Mature Secondary Structure
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWV
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCCC
GLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSML
CCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCC
YSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADF
HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
GLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLAR
CEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDPNSALF
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]