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The map label for this gene is 116494208

Identifier: 116494208

GI number: 116494208

Start: 660599

End: 661180

Strand: Direct

Name: 116494208

Synonym: LSEI_0659

Alternate gene names: NA

Gene position: 660599-661180 (Clockwise)

Preceding gene: 116494207

Following gene: 116494212

Centisome position: 22.82

GC content: 46.56

Gene sequence:

>582_bases
GTGACAGATGCAGACAAAATATTTGAGGCTATTCGTCAGGATCCCGATAACGCTGACTTTACCGCCCAAGGATGGGATCC
GCTATATCATATTGAACCTGAAGCAACGATCCTCATCGCCAGTCAGGCACCAGGGCGAAAAGCACAAACGACAAAAACAT
ACTGGAATGATCCAAGTGGTGACCGCTTGCGAACTTGGATGGGCGTCACCAAGGATCAGTTTTATCACAGTGGCAAGATT
GCCGTCTTGCCATTGGATTTTTACTATCCTGGCAAAGGCAAATCAGGCGACTTACCACCGCGTAAAGACTTCGCGGCCAA
GTGGCATCCTTCTTTGTTGGCCTTAATGCCAAAGATTCAACTTACAATTGTGATTGGTGCCTACGCTCAAAAATATTACT
TAAGAAAGCGCCGCGAAAAAACATTGACTGCTACCGTCAAAAATTTTCGGGCGTATTTACCTGACTATTTTCCGATCGTT
CATCCTTCGCCTCTAAACTATGGGTGGGTTAACCGTAATCCATGGTTTATGACCGATGTGGTGCCGGCATTACAGGCGCA
GGTTGCAGACTTGATGAAGTAG

Upstream 100 bases:

>100_bases
TGGACTATCCAACGTCCTTAATTCACGATGCGCGGCAGTTGGCTGCGGATTTTGAACGTAGCAAAGCATGGCCTAAGTTT
GTTAAAGGAGGGATTCAAGC

Downstream 100 bases:

>100_bases
AATGAATTAATGTGACGCGCTCGCAGGAGTCTACACATACCGACCTTGCAAAAGTCAGGCCATCATTCGCAGCCCTCAAA
TAAATGCGAACAGATTATCG

Product: Uracil-DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTDADKIFEAIRQDPDNADFTAQGWDPLYHIEPEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKI
AVLPLDFYYPGKGKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLRKRREKTLTATVKNFRAYLPDYFPIV
HPSPLNYGWVNRNPWFMTDVVPALQAQVADLMK

Sequences:

>Translated_193_residues
MTDADKIFEAIRQDPDNADFTAQGWDPLYHIEPEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKI
AVLPLDFYYPGKGKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLRKRREKTLTATVKNFRAYLPDYFPIV
HPSPLNYGWVNRNPWFMTDVVPALQAQVADLMK
>Mature_192_residues
TDADKIFEAIRQDPDNADFTAQGWDPLYHIEPEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIA
VLPLDFYYPGKGKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLRKRREKTLTATVKNFRAYLPDYFPIVH
PSPLNYGWVNRNPWFMTDVVPALQAQVADLMK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22121; Mature: 21989

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDADKIFEAIRQDPDNADFTAQGWDPLYHIEPEATILIASQAPGRKAQTTKTYWNDPSG
CCCHHHHHHHHHCCCCCCCEEECCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCC
DRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGKGKSGDLPPRKDFAAKWHPSLLALMPKIQ
CHHHHHHCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCEE
LTIVIGAYAQKYYLRKRREKTLTATVKNFRAYLPDYFPIVHPSPLNYGWVNRNPWFMTDV
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHH
VPALQAQVADLMK
HHHHHHHHHHHCC
>Mature Secondary Structure 
TDADKIFEAIRQDPDNADFTAQGWDPLYHIEPEATILIASQAPGRKAQTTKTYWNDPSG
CCHHHHHHHHHCCCCCCCEEECCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCC
DRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGKGKSGDLPPRKDFAAKWHPSLLALMPKIQ
CHHHHHHCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCEE
LTIVIGAYAQKYYLRKRREKTLTATVKNFRAYLPDYFPIVHPSPLNYGWVNRNPWFMTDV
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHH
VPALQAQVADLMK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]