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The map label for this gene is yhjX [H]

Identifier: 116494178

GI number: 116494178

Start: 622210

End: 623454

Strand: Direct

Name: yhjX [H]

Synonym: LSEI_0628

Alternate gene names: 116494178

Gene position: 622210-623454 (Clockwise)

Preceding gene: 116494177

Following gene: 116494179

Centisome position: 21.49

GC content: 52.29

Gene sequence:

>1245_bases
ATGAGTAAGCGTAGATATCTGGTCGCTATCGGCGGCATTTTGCTTCACCTGATGATTGGTTCCGTGTATGCATGGAGTGT
TTTCACTGGACCGATTGCCAAACAAACCGGTTGGGCGTTGTCATCGGTGACAGTTGCGTTTAGTATCGCGATCTTCTTCT
TGGGGATGAGCGCCGCCTTTATGGGTCGGCTGGTTGAGCGATTTGGTCCGCGACTGACAGGGACAGTTGCGGCGTTGCTA
TATGGCTCCGGCATTCTGTTGACAGGACTGGCGGTGCAACTTGAGTCTTTGCCGTTACTTTACATTGGGTATGGTGTTGT
TGGTGGTTTGGGATTAGGTGCGGGTTACGTGACCCCGGTTTCAACCATCATTGCTTGGTTTCCAGACAAGCGCGGGCTCG
CAACCGGCATGGCCATTATGGGCTTCGGTTTTGCTGCGATGCTGACCGGTCCGATTGCCCAGAACTTGATTGCTGGGGTT
GGACTGGTGCCAACGATGTATGTGCTCGGCACCGCATATTTACTTATTATGCTCACAGCAGCGCAGGTTATCCGGAAGCC
GCGTCCGGGTGAGGTTCCGGCTGCTGATATTGCTAAAAGTGTCAGTTTGACCGGTACTGCCATGACAGCCAATCAGGCAG
TCAAAACGCGTTCATTCCGCTACCTGTGGCTGATGTTTTTCATCAACATTACCTGTGGGATCGGGCTGGTTGCTGTTGCG
TCACCGATGGCGCAACAGCAAACCGGCATGTCTGCGGCTACGGCAGCGATGATGGTCGGGGTCGTAGGTTTGTTTAACGG
TTTTGGTCGACTGGCTTGGGCAACACTCTCGGATCTGATTGGCCGTCCGCTGACGTACACACTGATTTTTACGGTGGATG
TCGCTATGTTGGCTGGCATTCTGGTGTTCAGCTCACCATTGCTCTTCGGGATCGCCTTATGCCTGATCATGTCCTGCTAC
GGTGCAGGGTTCTCTGTCATTCCGGCCTACCTTGGCGATGTTTTTGGTACGAAACAGTTAGGTGCTATTCACGGCTATGT
CTTGACGGCGTGGGCAGTTGCTGGAGTTGTTGGACCGACCCTGCTTAGCCTTAGCGATCAATACTTCCACAGCTATACTT
ACAGTTTGATTTTCTTCGTTGCGCTTGAATTGGTTGCTTTTATTCTCTCGATTCGCATTCGCCGGCAGTTCAGCGTTGTG
GCTCGTGATGAAAAGGTGACGGATTCACTCGAAAGGCAACATTGA

Upstream 100 bases:

>100_bases
TTGCAATGGCTTCCTAGCCTCAATAATATATGTTATCCTTTTTATATCAGAACGATGGGTAGGACGGTTCTGATAAATAT
TGGGATGATGGAGGTAACGA

Downstream 100 bases:

>100_bases
TTGGCTAATACTGTGACAGCCTCGAAAAAGGCTGCTCGTGATCAACGAATGAATGGGGAAATTGACGGTTGTATTGGTCT
ATAACAATGAAGTTTATAAA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSKRRYLVAIGGILLHLMIGSVYAWSVFTGPIAKQTGWALSSVTVAFSIAIFFLGMSAAFMGRLVERFGPRLTGTVAALL
YGSGILLTGLAVQLESLPLLYIGYGVVGGLGLGAGYVTPVSTIIAWFPDKRGLATGMAIMGFGFAAMLTGPIAQNLIAGV
GLVPTMYVLGTAYLLIMLTAAQVIRKPRPGEVPAADIAKSVSLTGTAMTANQAVKTRSFRYLWLMFFINITCGIGLVAVA
SPMAQQQTGMSAATAAMMVGVVGLFNGFGRLAWATLSDLIGRPLTYTLIFTVDVAMLAGILVFSSPLLFGIALCLIMSCY
GAGFSVIPAYLGDVFGTKQLGAIHGYVLTAWAVAGVVGPTLLSLSDQYFHSYTYSLIFFVALELVAFILSIRIRRQFSVV
ARDEKVTDSLERQH

Sequences:

>Translated_414_residues
MSKRRYLVAIGGILLHLMIGSVYAWSVFTGPIAKQTGWALSSVTVAFSIAIFFLGMSAAFMGRLVERFGPRLTGTVAALL
YGSGILLTGLAVQLESLPLLYIGYGVVGGLGLGAGYVTPVSTIIAWFPDKRGLATGMAIMGFGFAAMLTGPIAQNLIAGV
GLVPTMYVLGTAYLLIMLTAAQVIRKPRPGEVPAADIAKSVSLTGTAMTANQAVKTRSFRYLWLMFFINITCGIGLVAVA
SPMAQQQTGMSAATAAMMVGVVGLFNGFGRLAWATLSDLIGRPLTYTLIFTVDVAMLAGILVFSSPLLFGIALCLIMSCY
GAGFSVIPAYLGDVFGTKQLGAIHGYVLTAWAVAGVVGPTLLSLSDQYFHSYTYSLIFFVALELVAFILSIRIRRQFSVV
ARDEKVTDSLERQH
>Mature_413_residues
SKRRYLVAIGGILLHLMIGSVYAWSVFTGPIAKQTGWALSSVTVAFSIAIFFLGMSAAFMGRLVERFGPRLTGTVAALLY
GSGILLTGLAVQLESLPLLYIGYGVVGGLGLGAGYVTPVSTIIAWFPDKRGLATGMAIMGFGFAAMLTGPIAQNLIAGVG
LVPTMYVLGTAYLLIMLTAAQVIRKPRPGEVPAADIAKSVSLTGTAMTANQAVKTRSFRYLWLMFFINITCGIGLVAVAS
PMAQQQTGMSAATAAMMVGVVGLFNGFGRLAWATLSDLIGRPLTYTLIFTVDVAMLAGILVFSSPLLFGIALCLIMSCYG
AGFSVIPAYLGDVFGTKQLGAIHGYVLTAWAVAGVVGPTLLSLSDQYFHSYTYSLIFFVALELVAFILSIRIRRQFSVVA
RDEKVTDSLERQH

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789969, Length=398, Percent_Identity=26.6331658291457, Blast_Score=137, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI193209150, Length=379, Percent_Identity=23.2189973614776, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43914; Mature: 43783

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
SKRRYLVAIGGILLHLMIGSVYAWSVFTGPIAKQTGWALSSVTVAFSIAIFFLGMSAAF
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MGRLVERFGPRLTGTVAALLYGSGILLTGLAVQLESLPLLYIGYGVVGGLGLGAGYVTPV
HHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHH
STIIAWFPDKRGLATGMAIMGFGFAAMLTGPIAQNLIAGVGLVPTMYVLGTAYLLIMLTA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQVIRKPRPGEVPAADIAKSVSLTGTAMTANQAVKTRSFRYLWLMFFINITCGIGLVAVA
HHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPMAQQQTGMSAATAAMMVGVVGLFNGFGRLAWATLSDLIGRPLTYTLIFTVDVAMLAGI
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LVFSSPLLFGIALCLIMSCYGAGFSVIPAYLGDVFGTKQLGAIHGYVLTAWAVAGVVGPT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LLSLSDQYFHSYTYSLIFFVALELVAFILSIRIRRQFSVVARDEKVTDSLERQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]