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The map label for this gene is 116494129

Identifier: 116494129

GI number: 116494129

Start: 564911

End: 565381

Strand: Direct

Name: 116494129

Synonym: LSEI_0575

Alternate gene names: NA

Gene position: 564911-565381 (Clockwise)

Preceding gene: 116494128

Following gene: 116494136

Centisome position: 19.51

GC content: 43.31

Gene sequence:

>471_bases
GTGATTGTTGATGCTCAAAGTGTTAAAACCACTGATTTAACGAAAAATAGTGGCTACGATGGCGGCAAAAAGATTTCAGG
GATTAAGCGTCATATGGCGGTTGATATTAATCGTTTACCACAAGCCATTCTCGTGACACGAGCTAATGTATCAGATCGTT
CAGGTGCATTGGCTATGTTTAGTTTGGCTAGCCAAAATTTAGAGCTGGTTCAGCCTGTCATGGTTGATGGTGGCTACACT
GGCAATGACTTTACGGATCAAGTGATGCTCATTTTGAATGCTAAGACGACGGTAGCTAAACGCAACGAGTTGCATACGTT
CACGGTGTTACCGCAACGATGGATCATTGAACGTTCATGGAGTTGGCTAGACAAATGTCGGCGACTTTGGAAAAACTGTG
AACGCGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCCGAAGATAGTTCTTAAAAGATACTAG

Upstream 100 bases:

>100_bases
ATAAACCAGACCCGACAGCTGATTCGCTATTAGAAAGGCTTTTAAAAAAACTGTCGCTTCCTATCGTTTTGCACAGGGCC
GATCGGCCCGAACGTCGTTT

Downstream 100 bases:

>100_bases
ACAGGTTCTCAGAACTGCTCATTGCTGCACTTATCTGTTTCTTGTCAGACTCAATTGTGTCTTGGCTAATTGCCGCTTGT
CCGCTCGCATCGTTCTGGTG

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase Of; Isxo3 Transposase Protein; Transposase Fragment; ISXo3 Transposase ORF B; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase-Like Protein; Transposase Is4 Family; IS Transposase; Transposase IS5 Family; Transposase Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINRLPQAILVTRANVSDRSGALAMFSLASQNLELVQPVMVDGGYT
GNDFTDQVMLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFPKIVLKRY

Sequences:

>Translated_156_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINRLPQAILVTRANVSDRSGALAMFSLASQNLELVQPVMVDGGYT
GNDFTDQVMLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFPKIVLKRY
>Mature_156_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINRLPQAILVTRANVSDRSGALAMFSLASQNLELVQPVMVDGGYT
GNDFTDQVMLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFPKIVLKRY

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17639; Mature: 17639

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINRLPQAILVTRANVSDRSGALAMF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHEE
SLASQNLELVQPVMVDGGYTGNDFTDQVMLILNAKTTVAKRNELHTFTVLPQRWIIERSW
HHHHCCHHHHHHEEECCCCCCCCCCCEEEEEEECCHHHHHCCCCEEEEECCHHHHHHCCH
SWLDKCRRLWKNCERALNSSLQMVVLAFPKIVLKRY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINRLPQAILVTRANVSDRSGALAMF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHEE
SLASQNLELVQPVMVDGGYTGNDFTDQVMLILNAKTTVAKRNELHTFTVLPQRWIIERSW
HHHHCCHHHHHHEEECCCCCCCCCCCEEEEEEECCHHHHHCCCCEEEEECCHHHHHHCCH
SWLDKCRRLWKNCERALNSSLQMVVLAFPKIVLKRY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA