Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494128

Identifier: 116494128

GI number: 116494128

Start: 564305

End: 564544

Strand: Direct

Name: 116494128

Synonym: LSEI_0574

Alternate gene names: NA

Gene position: 564305-564544 (Clockwise)

Preceding gene: 116494127

Following gene: 116494129

Centisome position: 19.49

GC content: 45.0

Gene sequence:

>240_bases
ATGCTGGAACAACAAGATCAGGTTTTGGCGGATTCTTCCTACCGGAAGCAGTTTTTTAAAATCAAAGATATGCGTGAACG
CCATGTCGATACCAGCATTGGCACTGTATCTTTTCGCCGTCGGTACTATGAAGATGTTCGTACCAATGAACGCATCTTTT
TGCTTGATGAGCAGATCGGCCTTGAAAAAAGTAGTCGGCTCGGTCTCGACCTCAAGGCCAAGTTATTAGAACCTGTCTAG

Upstream 100 bases:

>100_bases
TTCTACGTGGTAACTTTATTATTGCAATCTAGGCTTTGCCAATCTAGTCATCGAAACTCAAAAAAGTTTTGGAAAGACTC
TTTGTCAATTACTTGGTGTC

Downstream 100 bases:

>100_bases
TATCTGCTGAATCTGGTAGAATTGTGGAAAACCGACTGAGGAGTTTGTCATGCCAGATTATCCAAGCAATATTTCTCGAG
CGCAATTTGCGTTAATACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MLEQQDQVLADSSYRKQFFKIKDMRERHVDTSIGTVSFRRRYYEDVRTNERIFLLDEQIGLEKSSRLGLDLKAKLLEPV

Sequences:

>Translated_79_residues
MLEQQDQVLADSSYRKQFFKIKDMRERHVDTSIGTVSFRRRYYEDVRTNERIFLLDEQIGLEKSSRLGLDLKAKLLEPV
>Mature_79_residues
MLEQQDQVLADSSYRKQFFKIKDMRERHVDTSIGTVSFRRRYYEDVRTNERIFLLDEQIGLEKSSRLGLDLKAKLLEPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9451; Mature: 9451

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQQDQVLADSSYRKQFFKIKDMRERHVDTSIGTVSFRRRYYEDVRTNERIFLLDEQIG
CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
LEKSSRLGLDLKAKLLEPV
CCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLEQQDQVLADSSYRKQFFKIKDMRERHVDTSIGTVSFRRRYYEDVRTNERIFLLDEQIG
CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
LEKSSRLGLDLKAKLLEPV
CCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA