Click here to switch to the map view.

The map label for this gene is 116493474

Identifier: 116493474

GI number: 116493474

Start: 1722732

End: 1723355

Strand: Reverse

Name: 116493474

Synonym: PEPE_1746

Alternate gene names: NA

Gene position: 1723355-1722732 (Counterclockwise)

Preceding gene: 116493476

Following gene: 116493473

Centisome position: 94.05

GC content: 37.66

Gene sequence:

>624_bases
ATGGAAATTCCAACGATTTACAAGATGATGTATCAGAAAATGGGTAAACAGCCGTGGTTGGAAGAGTGGCAAGAATCGCC
ATGGGAAGTAGTCTATGGTGGCATCCTAGTCCAAAATACAAGTTGGGTCAATGTCGCACCAAGTTTAATGAATTTAAAGA
ACAACTTTAATTTTGATCCACATCGGATTTTGCGGCTTAGTAATGAAGCGTTACAAATTCAAATCCGTCCCAGCGGTTTT
TATACGCGAAAATCGCAAACCATCCAAAATGTCCTAACTTGGGCACAAAAATATCAGTTTTCAATCGAAAAAATTGGAGC
ATTGCCAACGTTGCGCCTACGTAAAGAATTATTGGCTTTGGTGGGGATTGGTCCAGAAACGGCGGACTATTTGATGATGT
ACGCATTTGACCATGCAGGTTTTATAGCTGATAAATATAGCCAACGAATTTTTGAGTGGATGGGGCATCCATTACCATCT
AAGTATGAACAGGCCAAAAAAGAAGTTGAAGCAGCAATTAATTTAACCGATGAAGAATGGAAAAATTTTCACGCGATGAT
TGTTAATTCTGGTAAAGAAATTAAAACTAAAGAAGAATTTGTGAATGAATACATTAATTCTTGA

Upstream 100 bases:

>100_bases
TAAAAACTTATAGTTGTTTCCAAGTATATTCTAACGCTAATTTTAGATTTATAGTGTTTTTTTGGAAAAGAATTATAATA
CATAGAGGGAGGAGACTGAC

Downstream 100 bases:

>100_bases
AATAGGGGTTAGCAAAGCATTCTAGGCGTTGTATACTAAATGTGAATACAATAACGAGGAGATAAAAAATTATGATTGAT
GTTGATGCTCTAAGCAAAAA

Product: DNA-3-methyladenine glycosylase III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEIPTIYKMMYQKMGKQPWLEEWQESPWEVVYGGILVQNTSWVNVAPSLMNLKNNFNFDPHRILRLSNEALQIQIRPSGF
YTRKSQTIQNVLTWAQKYQFSIEKIGALPTLRLRKELLALVGIGPETADYLMMYAFDHAGFIADKYSQRIFEWMGHPLPS
KYEQAKKEVEAAINLTDEEWKNFHAMIVNSGKEIKTKEEFVNEYINS

Sequences:

>Translated_207_residues
MEIPTIYKMMYQKMGKQPWLEEWQESPWEVVYGGILVQNTSWVNVAPSLMNLKNNFNFDPHRILRLSNEALQIQIRPSGF
YTRKSQTIQNVLTWAQKYQFSIEKIGALPTLRLRKELLALVGIGPETADYLMMYAFDHAGFIADKYSQRIFEWMGHPLPS
KYEQAKKEVEAAINLTDEEWKNFHAMIVNSGKEIKTKEEFVNEYINS
>Mature_207_residues
MEIPTIYKMMYQKMGKQPWLEEWQESPWEVVYGGILVQNTSWVNVAPSLMNLKNNFNFDPHRILRLSNEALQIQIRPSGF
YTRKSQTIQNVLTWAQKYQFSIEKIGALPTLRLRKELLALVGIGPETADYLMMYAFDHAGFIADKYSQRIFEWMGHPLPS
KYEQAKKEVEAAINLTDEEWKNFHAMIVNSGKEIKTKEEFVNEYINS

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: 4.2.99.18

Molecular weight: Translated: 24260; Mature: 24260

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPTIYKMMYQKMGKQPWLEEWQESPWEVVYGGILVQNTSWVNVAPSLMNLKNNFNFDP
CCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCEEEECCCCHHHCHHHHHHHCCCCCCH
HRILRLSNEALQIQIRPSGFYTRKSQTIQNVLTWAQKYQFSIEKIGALPTLRLRKELLAL
HHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VGIGPETADYLMMYAFDHAGFIADKYSQRIFEWMGHPLPSKYEQAKKEVEAAINLTDEEW
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
KNFHAMIVNSGKEIKTKEEFVNEYINS
HCEEEEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEIPTIYKMMYQKMGKQPWLEEWQESPWEVVYGGILVQNTSWVNVAPSLMNLKNNFNFDP
CCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCEEEECCCCHHHCHHHHHHHCCCCCCH
HRILRLSNEALQIQIRPSGFYTRKSQTIQNVLTWAQKYQFSIEKIGALPTLRLRKELLAL
HHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VGIGPETADYLMMYAFDHAGFIADKYSQRIFEWMGHPLPSKYEQAKKEVEAAINLTDEEW
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
KNFHAMIVNSGKEIKTKEEFVNEYINS
HCEEEEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]