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The map label for this gene is yvfS [H]

Identifier: 116493463

GI number: 116493463

Start: 1711903

End: 1712652

Strand: Reverse

Name: yvfS [H]

Synonym: PEPE_1735

Alternate gene names: 116493463

Gene position: 1712652-1711903 (Counterclockwise)

Preceding gene: 116493464

Following gene: 116493462

Centisome position: 93.47

GC content: 34.8

Gene sequence:

>750_bases
ATGCAGAAGATGATTGAACAACTGAAATTTGATGGAAAAAGATTAATTTTTCGAAATTATGGCTTCGTGTTCTTTTCATT
GCTGATGCCCACGGCCTTTTACATCCTATTTACGCAAATTAATAGAGTCCAAATTAAAACGTTTAGTGCAGAATATATGG
GGAGCATGATGGTTTACAGTATTTTAATTACTGCCATTATGGGCGTTGGCAATTTTATGGAGCGAGACCGTAACCAAGGA
TTAATTACGCTTTTAAAGATTACTAATCGTAATTTAAATCATTATTATATTTCGATTTGTTTTTGGAGTTTGATGATGAA
CATCTTTACGATTGTTATTTTAGGAACGACGGCGATTCTGATCAATCATGTTGATTTAAGTACTATGCAATGGATAACTA
TATTAGGACTAGTTTGGTTAGGTCAAATACCTCTGTTACTACTTGGAATTGCCATATCACATGTTAAACGACAAGAAACT
CTAACAATTTTAGGAAACTTAATTACATTTCCAGTGGCTATTTTAAGCGGGCTTTGGTGGCCAATTCAAATTTTACCGCA
GTGGGTTCAAAATATTGGTAATAAATTACCAACCTATTTTTTGAACGATATGATTAGTAGCACAGTGAATAATGCTAAAA
TTAACTGGAATGACGTTCAGGGTCTAGGAGTTTGGATAGTTGGATTGGTCGCCGCAATGACAGTAGGAACAATTATCACA
CGACGAAAGGGTAGATTGGCTCGTGGTTAA

Upstream 100 bases:

>100_bases
AGAGACTTAGTACCATATTTAGAGGAAATTCAACATTTGAACATCATCGATGCTTCACTAGAAAATATTTTTCAAACTAT
TACTCGAGGAGAAAAAAACA

Downstream 100 bases:

>100_bases
AAATAAATGGAATTTTAGAAATGTGAAATGGGAATATTATATCTGGTTATTATATATGCCATATAATATTTCGTTTTATT
TACCAATTAAATCGGCAACG

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQKMIEQLKFDGKRLIFRNYGFVFFSLLMPTAFYILFTQINRVQIKTFSAEYMGSMMVYSILITAIMGVGNFMERDRNQG
LITLLKITNRNLNHYYISICFWSLMMNIFTIVILGTTAILINHVDLSTMQWITILGLVWLGQIPLLLLGIAISHVKRQET
LTILGNLITFPVAILSGLWWPIQILPQWVQNIGNKLPTYFLNDMISSTVNNAKINWNDVQGLGVWIVGLVAAMTVGTIIT
RRKGRLARG

Sequences:

>Translated_249_residues
MQKMIEQLKFDGKRLIFRNYGFVFFSLLMPTAFYILFTQINRVQIKTFSAEYMGSMMVYSILITAIMGVGNFMERDRNQG
LITLLKITNRNLNHYYISICFWSLMMNIFTIVILGTTAILINHVDLSTMQWITILGLVWLGQIPLLLLGIAISHVKRQET
LTILGNLITFPVAILSGLWWPIQILPQWVQNIGNKLPTYFLNDMISSTVNNAKINWNDVQGLGVWIVGLVAAMTVGTIIT
RRKGRLARG
>Mature_249_residues
MQKMIEQLKFDGKRLIFRNYGFVFFSLLMPTAFYILFTQINRVQIKTFSAEYMGSMMVYSILITAIMGVGNFMERDRNQG
LITLLKITNRNLNHYYISICFWSLMMNIFTIVILGTTAILINHVDLSTMQWITILGLVWLGQIPLLLLGIAISHVKRQET
LTILGNLITFPVAILSGLWWPIQILPQWVQNIGNKLPTYFLNDMISSTVNNAKINWNDVQGLGVWIVGLVAAMTVGTIIT
RRKGRLARG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28423; Mature: 28423

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKMIEQLKFDGKRLIFRNYGFVFFSLLMPTAFYILFTQINRVQIKTFSAEYMGSMMVYS
CHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECHHHHHHHHHHH
ILITAIMGVGNFMERDRNQGLITLLKITNRNLNHYYISICFWSLMMNIFTIVILGTTAIL
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
INHVDLSTMQWITILGLVWLGQIPLLLLGIAISHVKRQETLTILGNLITFPVAILSGLWW
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PIQILPQWVQNIGNKLPTYFLNDMISSTVNNAKINWNDVQGLGVWIVGLVAAMTVGTIIT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRKGRLARG
HCCCCCCCC
>Mature Secondary Structure
MQKMIEQLKFDGKRLIFRNYGFVFFSLLMPTAFYILFTQINRVQIKTFSAEYMGSMMVYS
CHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECHHHHHHHHHHH
ILITAIMGVGNFMERDRNQGLITLLKITNRNLNHYYISICFWSLMMNIFTIVILGTTAIL
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
INHVDLSTMQWITILGLVWLGQIPLLLLGIAISHVKRQETLTILGNLITFPVAILSGLWW
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PIQILPQWVQNIGNKLPTYFLNDMISSTVNNAKINWNDVQGLGVWIVGLVAAMTVGTIIT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRKGRLARG
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]