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The map label for this gene is pcaC [H]

Identifier: 116493410

GI number: 116493410

Start: 1661100

End: 1661417

Strand: Reverse

Name: pcaC [H]

Synonym: PEPE_1682

Alternate gene names: 116493410

Gene position: 1661417-1661100 (Counterclockwise)

Preceding gene: 116493411

Following gene: 116493409

Centisome position: 90.67

GC content: 40.25

Gene sequence:

>318_bases
ATGGCTAAAAAACAGACCGCAGGACGCGAACAATTAGGTGAATTTGCACCAAAATTTGCAGAATTGAATGACGATGTATT
ATTCGGTGAAGTTTGGTCACGTGAAGACCAGCTTTCAGCTCGTGATCGGAGTATGATTACATGCGCAAGTCTGATGTCGC
AAGGCTTATTTCCCCAATTGGAAGCACACATGAAGATTGCTAAAGAAAATGGCGTAACTAAGGATGAAATGGTAGAACTA
ATTACACATCTTTCGTTTTATGCAGGTTGGCCTAAGGCATGGTCAGCATTTGGTTTAGCAAAGAAAATATTCGAATAA

Upstream 100 bases:

>100_bases
AAGATAGTTGGTTTGCACATGTAGCGATCACTGCTGGAACACCAGAATGGCTTGAAGCAGTTAGCGATGAACAATATAAG
GCAGTTGAGGAGGGCAAATA

Downstream 100 bases:

>100_bases
AATAGTAAGACAGCTGTCTCAATCTGAGGTAACTGTCTTTTTATTTACTAATGGTCTTTGCGTAATTAAAATTCCATAAA
TAGTTAAAACTACACAACCA

Product: gamma-carboxymuconolactone decarboxylase subunit-like protein

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MAKKQTAGREQLGEFAPKFAELNDDVLFGEVWSREDQLSARDRSMITCASLMSQGLFPQLEAHMKIAKENGVTKDEMVEL
ITHLSFYAGWPKAWSAFGLAKKIFE

Sequences:

>Translated_105_residues
MAKKQTAGREQLGEFAPKFAELNDDVLFGEVWSREDQLSARDRSMITCASLMSQGLFPQLEAHMKIAKENGVTKDEMVEL
ITHLSFYAGWPKAWSAFGLAKKIFE
>Mature_104_residues
AKKQTAGREQLGEFAPKFAELNDDVLFGEVWSREDQLSARDRSMITCASLMSQGLFPQLEAHMKIAKENGVTKDEMVELI
THLSFYAGWPKAWSAFGLAKKIFE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 11856; Mature: 11725

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKQTAGREQLGEFAPKFAELNDDVLFGEVWSREDQLSARDRSMITCASLMSQGLFPQL
CCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH
EAHMKIAKENGVTKDEMVELITHLSFYAGWPKAWSAFGLAKKIFE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKKQTAGREQLGEFAPKFAELNDDVLFGEVWSREDQLSARDRSMITCASLMSQGLFPQL
CCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH
EAHMKIAKENGVTKDEMVELITHLSFYAGWPKAWSAFGLAKKIFE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]