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The map label for this gene is 116493411

Identifier: 116493411

GI number: 116493411

Start: 1661417

End: 1661833

Strand: Reverse

Name: 116493411

Synonym: PEPE_1683

Alternate gene names: NA

Gene position: 1661833-1661417 (Counterclockwise)

Preceding gene: 116493412

Following gene: 116493410

Centisome position: 90.69

GC content: 43.41

Gene sequence:

>417_bases
ATGAAAAATGAAGCAGTAAAAAACGGGGTTATTTTCCCCGCTGGACCTAAAAATGATGCATACGCAAAATACTTTGTAGG
ACAAAGTTATCTACAGGGGCTTGTTTCAGACCCCGAAGTTAATGTTGGAGTTGGAAATGTTACTTTTGAGCCTGGCTGCC
GTAACAACTGGCATATTCATCATGATGGATTCCAAATTTTACTAGTAACGGGTGGAGAAGGCTGGTACCAAGAAGAAGGA
CAACCAGCACGCCATCTTACAGCTGGTGATGTTGTAGTAACCCATGATGGTGTAAAGCACTGGCATGGCGCAACTAAAGA
TAGTTGGTTTGCACATGTAGCGATCACTGCTGGAACACCAGAATGGCTTGAAGCAGTTAGCGATGAACAATATAAGGCAG
TTGAGGAGGGCAAATAA

Upstream 100 bases:

>100_bases
TTAGGGTTAGCAGTACAGGGTTCCAAAGTAGATAAGGCAGATCAAGCAGTAGCAAATTGGTTAGAACAGTTAAATTTAAT
TTAAAAGGAGTAGTTTAATT

Downstream 100 bases:

>100_bases
TGGCTAAAAAACAGACCGCAGGACGCGAACAATTAGGTGAATTTGCACCAAAATTTGCAGAATTGAATGACGATGTATTA
TTCGGTGAAGTTTGGTCACG

Product: double-stranded beta-helix-like protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Family Protein; Cupin 2 Barrel; Cupin Domain Protein; Transcriptional Regulator; Double-Stranded Beta-Helix-Like Protein; Cupin Region; Carboxymuconolactone Decarboxylase Family Protein; Cupin Domain-Containing Protein; Cupin 2 Barrel Domain-Containing Protein; Conserved Protein; RmlC-Type Cupin; LOW QUALITY PROTEIN Cupin Domain-Containing Protein; Gamma-Carboxymuconolactone Decarboxylase Subunit; ABC-2 Type Transporter; LOW QUALITY PROTEIN Carboxymuconolactone Decarboxylase; Double-Stranded Beta-Helix Protein; Secreted Protein; Exported RmlC-Type Cupin

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKNEAVKNGVIFPAGPKNDAYAKYFVGQSYLQGLVSDPEVNVGVGNVTFEPGCRNNWHIHHDGFQILLVTGGEGWYQEEG
QPARHLTAGDVVVTHDGVKHWHGATKDSWFAHVAITAGTPEWLEAVSDEQYKAVEEGK

Sequences:

>Translated_138_residues
MKNEAVKNGVIFPAGPKNDAYAKYFVGQSYLQGLVSDPEVNVGVGNVTFEPGCRNNWHIHHDGFQILLVTGGEGWYQEEG
QPARHLTAGDVVVTHDGVKHWHGATKDSWFAHVAITAGTPEWLEAVSDEQYKAVEEGK
>Mature_138_residues
MKNEAVKNGVIFPAGPKNDAYAKYFVGQSYLQGLVSDPEVNVGVGNVTFEPGCRNNWHIHHDGFQILLVTGGEGWYQEEG
QPARHLTAGDVVVTHDGVKHWHGATKDSWFAHVAITAGTPEWLEAVSDEQYKAVEEGK

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15143; Mature: 15143

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEAVKNGVIFPAGPKNDAYAKYFVGQSYLQGLVSDPEVNVGVGNVTFEPGCRNNWHIH
CCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHCCCCCCEEEECCEEECCCCCCCCEEE
HDGFQILLVTGGEGWYQEEGQPARHLTAGDVVVTHDGVKHWHGATKDSWFAHVAITAGTP
ECCEEEEEEECCCCCCCCCCCCCCEEECCCEEEEECCCHHHCCCCCCCEEEEEEEECCCH
EWLEAVSDEQYKAVEEGK
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKNEAVKNGVIFPAGPKNDAYAKYFVGQSYLQGLVSDPEVNVGVGNVTFEPGCRNNWHIH
CCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHCCCCCCEEEECCEEECCCCCCCCEEE
HDGFQILLVTGGEGWYQEEGQPARHLTAGDVVVTHDGVKHWHGATKDSWFAHVAITAGTP
ECCEEEEEEECCCCCCCCCCCCCCEEECCCEEEEECCCHHHCCCCCCCEEEEEEEECCCH
EWLEAVSDEQYKAVEEGK
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA