Click here to switch to the map view.

The map label for this gene is 116493374

Identifier: 116493374

GI number: 116493374

Start: 1630503

End: 1630955

Strand: Reverse

Name: 116493374

Synonym: PEPE_1646

Alternate gene names: NA

Gene position: 1630955-1630503 (Counterclockwise)

Preceding gene: 116493375

Following gene: 116493373

Centisome position: 89.01

GC content: 35.76

Gene sequence:

>453_bases
TTGAATACCAGTGATGAAATTGAAATTAGTCAATCAGAATGGGAAACAATGCGAGTAATATGGACGCTCCAAAAGGCTAC
GAGTCATCAAATTATCGAAATTTTGGAAGAGAAGTTGGGATGGAAAGCTTCCACCACTAAAACTTATTTAGGGCGATTAG
TAAAAAAAGGGGCTTTAAGAACCAGTAAAAATGGACGAGAATTTATTTATCAGCCCATGATTGAAGAACAAGTTGCAATG
GATAATGCTTCTAAATCCCTTTTTGTCCATCTTTGCCAACATAAGGTAGGGACTACTTTAGCTAATTTGATTGATCAAAT
TGAATTATCTAAAAGTGACATTCAAATGTTAATTGGTAAGTTGGAGGAAAAGGCACAAACAGCACCGGATAAGGTGAGCT
GTAATTGTTTGCCAGAAAACTGTGATATGGATTGTAAGATGGAGGATATGTAA

Upstream 100 bases:

>100_bases
AGACCCGATGGAAATCGAGGTCTTTTTTCTTGACTTTTTAAGTTTACAAATGTAGTCTATATTTAAAGATTACATTTGTA
AACAGATTGGAGGGTATAGT

Downstream 100 bases:

>100_bases
CATGAATCATAAGCAAATGAATGAAGAGCACATGGACCATTCAAAAATGGATCATTCCCAGATGCATCATGAGATGAGTG
GACATCAACATGACATGCAC

Product: transcriptional regulator

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNTSDEIEISQSEWETMRVIWTLQKATSHQIIEILEEKLGWKASTTKTYLGRLVKKGALRTSKNGREFIYQPMIEEQVAM
DNASKSLFVHLCQHKVGTTLANLIDQIELSKSDIQMLIGKLEEKAQTAPDKVSCNCLPENCDMDCKMEDM

Sequences:

>Translated_150_residues
MNTSDEIEISQSEWETMRVIWTLQKATSHQIIEILEEKLGWKASTTKTYLGRLVKKGALRTSKNGREFIYQPMIEEQVAM
DNASKSLFVHLCQHKVGTTLANLIDQIELSKSDIQMLIGKLEEKAQTAPDKVSCNCLPENCDMDCKMEDM
>Mature_150_residues
MNTSDEIEISQSEWETMRVIWTLQKATSHQIIEILEEKLGWKASTTKTYLGRLVKKGALRTSKNGREFIYQPMIEEQVAM
DNASKSLFVHLCQHKVGTTLANLIDQIELSKSDIQMLIGKLEEKAQTAPDKVSCNCLPENCDMDCKMEDM

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BlaI transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014071
- InterPro:   IPR005650
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03965 Pencillinase_R [H]

EC number: NA

Molecular weight: Translated: 17098; Mature: 17098

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSDEIEISQSEWETMRVIWTLQKATSHQIIEILEEKLGWKASTTKTYLGRLVKKGALR
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
TSKNGREFIYQPMIEEQVAMDNASKSLFVHLCQHKVGTTLANLIDQIELSKSDIQMLIGK
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LEEKAQTAPDKVSCNCLPENCDMDCKMEDM
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSDEIEISQSEWETMRVIWTLQKATSHQIIEILEEKLGWKASTTKTYLGRLVKKGALR
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
TSKNGREFIYQPMIEEQVAMDNASKSLFVHLCQHKVGTTLANLIDQIELSKSDIQMLIGK
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LEEKAQTAPDKVSCNCLPENCDMDCKMEDM
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9172326 [H]