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The map label for this gene is glyQ

Identifier: 116492864

GI number: 116492864

Start: 1102666

End: 1103565

Strand: Reverse

Name: glyQ

Synonym: PEPE_1102

Alternate gene names: 116492864

Gene position: 1103565-1102666 (Counterclockwise)

Preceding gene: 116492865

Following gene: 116492863

Centisome position: 60.23

GC content: 38.33

Gene sequence:

>900_bases
ATGAATAAGAAACTTTCAGTCCAAGAAATTATTTTAACATTACAAAAATATTGGGCAGAACAAGGATGTATGCTCATGGA
AGCATATGATACAGAAAAGGGTGCCGGGACAATGAGCCCATACACATTTTTACGAGCAATTGGTCCAGAACCTTGGAATG
CTGCTTATGTTGAACCATCACGTCGTCCAGCGGACGGACGTTATGGAGAAAACCCTAACCGTTTATACCAACATCACCAA
TTCCAAGTAGTAATGAAACCTTCTCCTGAAAACATCCAAGAGCTTTATTTAGGTAGCTTAAAAGCCCTTGGAATTGATCC
ATTGGAACATGATATCCGCTTCGTTGAAGATAACTGGGAAAATCCCTCAATGGGTTGTGCCGGTGTTGGTTGGGAAGTTT
GGCTTGACGGAATGGAAGTTACTCAATTTACATATTTCCAACAAGTTGGTGGTTTAGAAGTAAATCCTGTAACTAGTGAA
GTTACCTATGGATTGGAACGTTTGTCATCATACATTCAAGACGTGGAATCGGTTTTCGATCTAGAATGGGGTAACGGAGT
TTCATATGGTGATATTTTCAGAGAACCTGAATTTGAACATTCAAAATATTCATTTGAAGAATCTAACCAAGCAATGCTGG
AAAAAATGTTTAACGATTTTGAAGCTGAAGCTAATCGTTTAATTGAAGAAGGTCTAGTACATCCAGCCTATGATTACATT
CTAAAATGTAGCCATACCTTCAATTTATTAGATGCTCGAGGAACAGTTTCAGTTACAGAACGTGCTGGTTTCTTATCCCG
TATTCGTAATATGGCTCGTAAGGTAGCACGGGCATTTGTGGAAGAACGTGAAAAATTAGGATTCCCATTATTAAAAAATA
ACGAAGAGGAGGCAAAATAA

Upstream 100 bases:

>100_bases
GGAAGTAGGGTGGAACCGCGACTCTTGTCGTCCCTACGTAGTGTATTTTTAGTACACTGCGTAGGGATTTTTTTGTCCGC
TAAATTAAAAGGAGGAACTT

Downstream 100 bases:

>100_bases
TGGCACATAATTATTTACTAGAAATTGGATTGGAAGAAATTCCGGCCCATGTTGTAACTCCAAGTATCAAACAGTTAGTA
CAAAAAGTAACAGCCTTCTT

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MNKKLSVQEIILTLQKYWAEQGCMLMEAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQ
FQVVMKPSPENIQELYLGSLKALGIDPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEVTQFTYFQQVGGLEVNPVTSE
VTYGLERLSSYIQDVESVFDLEWGNGVSYGDIFREPEFEHSKYSFEESNQAMLEKMFNDFEAEANRLIEEGLVHPAYDYI
LKCSHTFNLLDARGTVSVTERAGFLSRIRNMARKVARAFVEEREKLGFPLLKNNEEEAK

Sequences:

>Translated_299_residues
MNKKLSVQEIILTLQKYWAEQGCMLMEAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQ
FQVVMKPSPENIQELYLGSLKALGIDPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEVTQFTYFQQVGGLEVNPVTSE
VTYGLERLSSYIQDVESVFDLEWGNGVSYGDIFREPEFEHSKYSFEESNQAMLEKMFNDFEAEANRLIEEGLVHPAYDYI
LKCSHTFNLLDARGTVSVTERAGFLSRIRNMARKVARAFVEEREKLGFPLLKNNEEEAK
>Mature_299_residues
MNKKLSVQEIILTLQKYWAEQGCMLMEAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQ
FQVVMKPSPENIQELYLGSLKALGIDPLEHDIRFVEDNWENPSMGCAGVGWEVWLDGMEVTQFTYFQQVGGLEVNPVTSE
VTYGLERLSSYIQDVESVFDLEWGNGVSYGDIFREPEFEHSKYSFEESNQAMLEKMFNDFEAEANRLIEEGLVHPAYDYI
LKCSHTFNLLDARGTVSVTERAGFLSRIRNMARKVARAFVEEREKLGFPLLKNNEEEAK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=296, Percent_Identity=60.1351351351351, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_PEDPA (Q03F65)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804599.1
- ProteinModelPortal:   Q03F65
- SMR:   Q03F65
- STRING:   Q03F65
- GeneID:   4417037
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1102
- NMPDR:   fig|278197.10.peg.966
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- PhylomeDB:   Q03F65
- ProtClustDB:   PRK09348
- BioCyc:   PPEN278197:PEPE_1102-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34357; Mature: 34357

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLSVQEIILTLQKYWAEQGCMLMEAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEECCC
RRPADGRYGENPNRLYQHHQFQVVMKPSPENIQELYLGSLKALGIDPLEHDIRFVEDNWE
CCCCCCCCCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHEECCCCCC
NPSMGCAGVGWEVWLDGMEVTQFTYFQQVGGLEVNPVTSEVTYGLERLSSYIQDVESVFD
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHC
LEWGNGVSYGDIFREPEFEHSKYSFEESNQAMLEKMFNDFEAEANRLIEEGLVHPAYDYI
CCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LKCSHTFNLLDARGTVSVTERAGFLSRIRNMARKVARAFVEEREKLGFPLLKNNEEEAK
HHHCCHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
>Mature Secondary Structure
MNKKLSVQEIILTLQKYWAEQGCMLMEAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEECCC
RRPADGRYGENPNRLYQHHQFQVVMKPSPENIQELYLGSLKALGIDPLEHDIRFVEDNWE
CCCCCCCCCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHEECCCCCC
NPSMGCAGVGWEVWLDGMEVTQFTYFQQVGGLEVNPVTSEVTYGLERLSSYIQDVESVFD
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHC
LEWGNGVSYGDIFREPEFEHSKYSFEESNQAMLEKMFNDFEAEANRLIEEGLVHPAYDYI
CCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LKCSHTFNLLDARGTVSVTERAGFLSRIRNMARKVARAFVEEREKLGFPLLKNNEEEAK
HHHCCHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA