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The map label for this gene is ypmR [H]

Identifier: 116492828

GI number: 116492828

Start: 1061388

End: 1062305

Strand: Reverse

Name: ypmR [H]

Synonym: PEPE_1065

Alternate gene names: 116492828

Gene position: 1062305-1061388 (Counterclockwise)

Preceding gene: 116492829

Following gene: 116492827

Centisome position: 57.97

GC content: 34.53

Gene sequence:

>918_bases
ATGAAAGTAGTCAGAGAAATTTTATTTAGTATCATTGGTATTTCGGTTATCACGCTTTTAATTTTATGGGGGTTGGGCTT
TTTTAAAGGAGCTAAGACACCGTCTCAAGTTGCTAACAAAGTCGTACCGACAACCCAGAAAAAAGTTAAAAATCTTAAGA
TTTTAGCATTAGGTGACTCTCTCACTCAAGGAGTTGGCGATACAAAGAATCAAAGTGGATATCAGCAACGTTTAGCTAAG
AAAATTACTAAAACCAAACAGATAAAAAAGGAAACGATTTACGATGAGGGAGTTAGTGGTGAACGTAGTGATCAAATCCT
TAAACGCTTCAAAACTACTACTAAAATTCAAAAAGAGGCTGCTAAAAGTGATGTACTTATTGTTACGGCCGGGGGAAATG
ATCTTTTCCAGAATCTCCAGAAAGATGTTACTGAATCACCTAGTCAAGTTGCCGTAAATGTTAATCGTATTAGTCTTACT
TATCAAGACAACTTAGAAAATATTTTTAAATATGCAAGAAAGCTGAATCCCAAAATTAAAATTGTTATGGTAGGAATTTA
TAACCCATTTTACGTATATTTCCCAAATGTAGTGGCTATCACAGATGCGATAAATACATTTAATACCACAGCAAAAGCCA
CTGGTGATTATTTTAAGCATGCTACTTTTGTTGATATCAATGCATTATCAGTGGGTCAATATAAGACGCTTAGTCAGCAG
CAGCGTTTAAAGAAACAAAGTACCGAGGATGATATTGCGGTTGTTGAAAAGAGTCAACTTGAGAAAAGTAAATTTGATAC
TAAAGAAAAAAATAATTATTTATCGGATGCAGATCATTTTCATCCCAACGACAAGGGATATGATATGATGGCAGATAAGA
TCTTTAAGGCCATGGATCGGGCAAGAATTTTCAAGTAG

Upstream 100 bases:

>100_bases
GGTGCGTTTTGTATCTTATATTACAGTGAAGATTAAAAAGTAGGGCTTAGATCGGGACTAACCGATTTTGGCCCTAATTT
ATTTTACAGAGAGAGGCATT

Downstream 100 bases:

>100_bases
GTGAAGAAATGAATAAATATATGTATCATTTTTGGAAATGGGGATTTTTAGTCCTGCTCTCCATTTTTTTAGCGGGCGGT
ATTTATGTAACTTTTAAAGC

Product: lysophospholipase L1 related esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKVVREILFSIIGISVITLLILWGLGFFKGAKTPSQVANKVVPTTQKKVKNLKILALGDSLTQGVGDTKNQSGYQQRLAK
KITKTKQIKKETIYDEGVSGERSDQILKRFKTTTKIQKEAAKSDVLIVTAGGNDLFQNLQKDVTESPSQVAVNVNRISLT
YQDNLENIFKYARKLNPKIKIVMVGIYNPFYVYFPNVVAITDAINTFNTTAKATGDYFKHATFVDINALSVGQYKTLSQQ
QRLKKQSTEDDIAVVEKSQLEKSKFDTKEKNNYLSDADHFHPNDKGYDMMADKIFKAMDRARIFK

Sequences:

>Translated_305_residues
MKVVREILFSIIGISVITLLILWGLGFFKGAKTPSQVANKVVPTTQKKVKNLKILALGDSLTQGVGDTKNQSGYQQRLAK
KITKTKQIKKETIYDEGVSGERSDQILKRFKTTTKIQKEAAKSDVLIVTAGGNDLFQNLQKDVTESPSQVAVNVNRISLT
YQDNLENIFKYARKLNPKIKIVMVGIYNPFYVYFPNVVAITDAINTFNTTAKATGDYFKHATFVDINALSVGQYKTLSQQ
QRLKKQSTEDDIAVVEKSQLEKSKFDTKEKNNYLSDADHFHPNDKGYDMMADKIFKAMDRARIFK
>Mature_305_residues
MKVVREILFSIIGISVITLLILWGLGFFKGAKTPSQVANKVVPTTQKKVKNLKILALGDSLTQGVGDTKNQSGYQQRLAK
KITKTKQIKKETIYDEGVSGERSDQILKRFKTTTKIQKEAAKSDVLIVTAGGNDLFQNLQKDVTESPSQVAVNVNRISLT
YQDNLENIFKYARKLNPKIKIVMVGIYNPFYVYFPNVVAITDAINTFNTTAKATGDYFKHATFVDINALSVGQYKTLSQQ
QRLKKQSTEDDIAVVEKSQLEKSKFDTKEKNNYLSDADHFHPNDKGYDMMADKIFKAMDRARIFK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 34395; Mature: 34395

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVREILFSIIGISVITLLILWGLGFFKGAKTPSQVANKVVPTTQKKVKNLKILALGDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCEEEEEECCH
LTQGVGDTKNQSGYQQRLAKKITKTKQIKKETIYDEGVSGERSDQILKRFKTTTKIQKEA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AKSDVLIVTAGGNDLFQNLQKDVTESPSQVAVNVNRISLTYQDNLENIFKYARKLNPKIK
CCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHCCCCEE
IVMVGIYNPFYVYFPNVVAITDAINTFNTTAKATGDYFKHATFVDINALSVGQYKTLSQQ
EEEEECCCCEEEECCCHHEEHHHHHHHCCCHHHCHHHHHCEEEEEEEEECCCHHHHHHHH
QRLKKQSTEDDIAVVEKSQLEKSKFDTKEKNNYLSDADHFHPNDKGYDMMADKIFKAMDR
HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ARIFK
HHCCC
>Mature Secondary Structure
MKVVREILFSIIGISVITLLILWGLGFFKGAKTPSQVANKVVPTTQKKVKNLKILALGDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCEEEEEECCH
LTQGVGDTKNQSGYQQRLAKKITKTKQIKKETIYDEGVSGERSDQILKRFKTTTKIQKEA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AKSDVLIVTAGGNDLFQNLQKDVTESPSQVAVNVNRISLTYQDNLENIFKYARKLNPKIK
CCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHCCCCEE
IVMVGIYNPFYVYFPNVVAITDAINTFNTTAKATGDYFKHATFVDINALSVGQYKTLSQQ
EEEEECCCCEEEECCCHHEEHHHHHHHCCCHHHCHHHHHCEEEEEEEEECCCHHHHHHHH
QRLKKQSTEDDIAVVEKSQLEKSKFDTKEKNNYLSDADHFHPNDKGYDMMADKIFKAMDR
HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ARIFK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]