| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is lacX [H]
Identifier: 116492724
GI number: 116492724
Start: 963999
End: 964880
Strand: Reverse
Name: lacX [H]
Synonym: PEPE_0961
Alternate gene names: 116492724
Gene position: 964880-963999 (Counterclockwise)
Preceding gene: 116492725
Following gene: 116492722
Centisome position: 52.66
GC content: 38.21
Gene sequence:
>882_bases ATGACGGTTACTTTAAAAAATGACTATTTAACAGTCCAAATTAACGAAAAAGGGGCCGAGTTATCCAGTGTTAAGGCTAA TGATGGGATTGAATACATTTGGCAAGCCGACCCTGCAGTATGGGGCCGACATGCCCCAGTGTTATTTCCCTTTGTTGGAC GTCTAAAGGATGACCAATTCCAAGTGGAGGATCAAACTTATCCTATGGGTCAACATGGATTTGCGCGGGATATGGATTTT GAAGCAGTTGAACAAGATGATCAACACGTAATTATGGAATTAAATAGCGATACAGAAACTCTTCAAAAATTTCCATTTGA GTTTAAACTACGTTTGCACTTCACATTAAAGGATCATGAATTGATCGAGCATTACGAAGTAGTTAATCCTGATTCTAAAA AAGATTTATTATTTTCGATTGGCGGGCACCCTGGATTTAATCTAAATCTTGGAGATAACCAAATTCAGATGGAAGATACT CATATTCGAATCGCGCCTAAACAAGTGTATAATCAAATTCCACTTAAGGCACCTTACACGGATCCTAAAAACCCTATCAA GTTTGATGCTACAACTCCGCTTGATTTAACGCATGCGCTCTTTAAAGATGACGCCATCATCTTGGACCTTAAGGGAGAAC AAATCACCTTAATGACCGAAAATGAAGTGAATAATCACGGTATTGCGTTTACGGTTGCTAACGCTCCATACCTTGGTATT TGGTCACCATATCCAGCCACTGCTAATTTTGTTTGTTTAGAACCGTGGTGGGGAATTGCTGATACTGTCAATTTCAATGG TGAATTAAAAGATAAGCTTGGTGTAAATCGTTTAGCTGCACAAGAAACATTTAATCAAGAATTTTCAATGTCATTCTTCT AA
Upstream 100 bases:
>100_bases AAGTAACGATTACTGAAAAATATGTTGATGACAAAATCGGTAGCATTGCACAAAATAAAGATCTGAGCGAGTTTATCTTA TAGTAGGAGGATTTTGACCG
Downstream 100 bases:
>100_bases AAAGAAAACCCCTAAAGGGTCAGGTTCGCGAGTTAGTAAGGCGAAACCTAATCTTTTAGGGGTTTTGTATGTAATTCAAA CCGCAGCTACTTATTTTTCT
Product: galactose mutarotase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQFQVEDQTYPMGQHGFARDMDF EAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHELIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDT HIRIAPKQVYNQIPLKAPYTDPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF
Sequences:
>Translated_293_residues MTVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQFQVEDQTYPMGQHGFARDMDF EAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHELIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDT HIRIAPKQVYNQIPLKAPYTDPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF >Mature_292_residues TVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQFQVEDQTYPMGQHGFARDMDFE AVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHELIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDTH IRIAPKQVYNQIPLKAPYTDPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGIW SPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 33436; Mature: 33305
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQF CEEEEECCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHCCCCCCCE QVEDQTYPMGQHGFARDMDFEAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHE EECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCHHHHHHCCEEEEEEEEEEECCHH LIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDTHIRIAPKQVYNQIPLKAPYT HHHHHEECCCCCCCEEEEEECCCCCEEEECCCCEEEEECCEEEEEHHHHHHCCCCCCCCC DPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI CCCCCEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEE WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF ECCCCCCCCEEEECCCCCCEEEEECCCCCHHHCCCHHHHHHHHCCCCEEEECC >Mature Secondary Structure TVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQF EEEEECCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHCCCCCCCE QVEDQTYPMGQHGFARDMDFEAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHE EECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCHHHHHHCCEEEEEEEEEEECCHH LIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDTHIRIAPKQVYNQIPLKAPYT HHHHHEECCCCCCCEEEEEECCCCCEEEECCCCEEEEECCEEEEEHHHHHHCCCCCCCCC DPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI CCCCCEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEE WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF ECCCCCCCCEEEECCCCCCEEEEECCCCCHHHCCCHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339371 [H]