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The map label for this gene is yitU [H]

Identifier: 116492680

GI number: 116492680

Start: 913808

End: 914620

Strand: Reverse

Name: yitU [H]

Synonym: PEPE_0915

Alternate gene names: 116492680

Gene position: 914620-913808 (Counterclockwise)

Preceding gene: 116492683

Following gene: 116492678

Centisome position: 49.91

GC content: 38.75

Gene sequence:

>813_bases
ATGCATCAAAAATTAATCACTCTTGATTTAGATGGCACCACCTTAAATTCAAGTAGTCAACTCTCACCTCAAACCATTAA
AACTATCAAAAATGCCACGGCAGCTGGACACATCGTTTCCATTGTTACGGGACGACCTTATCGCATGGCTCGCGATATTT
ACGATGAACTTAGCCTTAAAACGCCGATGGCGAATTTTAATGGGGCTTTAACACATATTCCTCACCAAAAATGGGATGGT
GAATATTCCAGAACCATCAACAAAGCGGTCGTCTACGATCTGATGAAGCATAAAGATGACTACGGTATTCAATTACTTGC
GGTTGAAAGTAAAGATTCATTTTTTGCGGATCATGCGGCTCCCGCTTCATTTGAATTTTTTCCTCATGAAATTTCCAATG
ACCAAATTTTAACCGAAAAAACGTTAAGAACTAATCCAACTTCAATTACGATTTTAGTGGAACCTAATAGTGCTCAAAAA
GTTAAAAATCAATTACTACACTATTATGGGGAATATATTACTGTCGGCGTTTGGGGCGGACCCCAAAGTGTTCTGGAAAT
CGTTTCTAAAGGTATTCAGAAAGCCAAGGCGGTGGCCTACTTAGCAGATTACTATCATATTGATCGACGGGATACAATTG
CCTTTGGAGATGAACATAACGATGCTGAAATGCTAGATTATGTTGGCCGTGGAGTGGCAATGAAAAATGCTACGGACCAA
ATTAAAGGAATTGCTAATGATATTACTGAATTTGATAATACCGAAGATGGTGTTGCAAAGTATCTCAATGAATATCTCGG
TTTAGCCGAGTAA

Upstream 100 bases:

>100_bases
CACCTTAACAATTCATTTAACTTCCTAAAGTACTCTAGTTTTTTAAATTTAACCATGTTAACTTATAAGTAATACAGAAA
ATAGTAAAAGGAGCGATCAA

Downstream 100 bases:

>100_bases
AAAACTTCAAAATCACTGATCTTTCAGTTGATTTTGAAGTTTTTTTATTATTTTTCGTCGCTCTTTAAAGTTCCGGCAAC
CGAATAATGATTTTTTGACA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MHQKLITLDLDGTTLNSSSQLSPQTIKTIKNATAAGHIVSIVTGRPYRMARDIYDELSLKTPMANFNGALTHIPHQKWDG
EYSRTINKAVVYDLMKHKDDYGIQLLAVESKDSFFADHAAPASFEFFPHEISNDQILTEKTLRTNPTSITILVEPNSAQK
VKNQLLHYYGEYITVGVWGGPQSVLEIVSKGIQKAKAVAYLADYYHIDRRDTIAFGDEHNDAEMLDYVGRGVAMKNATDQ
IKGIANDITEFDNTEDGVAKYLNEYLGLAE

Sequences:

>Translated_270_residues
MHQKLITLDLDGTTLNSSSQLSPQTIKTIKNATAAGHIVSIVTGRPYRMARDIYDELSLKTPMANFNGALTHIPHQKWDG
EYSRTINKAVVYDLMKHKDDYGIQLLAVESKDSFFADHAAPASFEFFPHEISNDQILTEKTLRTNPTSITILVEPNSAQK
VKNQLLHYYGEYITVGVWGGPQSVLEIVSKGIQKAKAVAYLADYYHIDRRDTIAFGDEHNDAEMLDYVGRGVAMKNATDQ
IKGIANDITEFDNTEDGVAKYLNEYLGLAE
>Mature_270_residues
MHQKLITLDLDGTTLNSSSQLSPQTIKTIKNATAAGHIVSIVTGRPYRMARDIYDELSLKTPMANFNGALTHIPHQKWDG
EYSRTINKAVVYDLMKHKDDYGIQLLAVESKDSFFADHAAPASFEFFPHEISNDQILTEKTLRTNPTSITILVEPNSAQK
VKNQLLHYYGEYITVGVWGGPQSVLEIVSKGIQKAKAVAYLADYYHIDRRDTIAFGDEHNDAEMLDYVGRGVAMKNATDQ
IKGIANDITEFDNTEDGVAKYLNEYLGLAE

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=277, Percent_Identity=28.8808664259928, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI48994981, Length=266, Percent_Identity=26.3157894736842, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI87081741, Length=266, Percent_Identity=25.187969924812, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787043, Length=270, Percent_Identity=24.4444444444444, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30159; Mature: 30159

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQKLITLDLDGTTLNSSSQLSPQTIKTIKNATAAGHIVSIVTGRPYRMARDIYDELSLK
CCCEEEEEEECCCEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCC
TPMANFNGALTHIPHQKWDGEYSRTINKAVVYDLMKHKDDYGIQLLAVESKDSFFADHAA
CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCC
PASFEFFPHEISNDQILTEKTLRTNPTSITILVEPNSAQKVKNQLLHYYGEYITVGVWGG
CCCCCCCCCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCC
PQSVLEIVSKGIQKAKAVAYLADYYHIDRRDTIAFGDEHNDAEMLDYVGRGVAMKNATDQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEEECCHHHH
IKGIANDITEFDNTEDGVAKYLNEYLGLAE
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHQKLITLDLDGTTLNSSSQLSPQTIKTIKNATAAGHIVSIVTGRPYRMARDIYDELSLK
CCCEEEEEEECCCEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCC
TPMANFNGALTHIPHQKWDGEYSRTINKAVVYDLMKHKDDYGIQLLAVESKDSFFADHAA
CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCC
PASFEFFPHEISNDQILTEKTLRTNPTSITILVEPNSAQKVKNQLLHYYGEYITVGVWGG
CCCCCCCCCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCC
PQSVLEIVSKGIQKAKAVAYLADYYHIDRRDTIAFGDEHNDAEMLDYVGRGVAMKNATDQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEEECCHHHH
IKGIANDITEFDNTEDGVAKYLNEYLGLAE
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]