Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492635
Identifier: 116492635
GI number: 116492635
Start: 871343
End: 871942
Strand: Reverse
Name: 116492635
Synonym: PEPE_0869
Alternate gene names: NA
Gene position: 871942-871343 (Counterclockwise)
Preceding gene: 116492636
Following gene: 116492619
Centisome position: 47.59
GC content: 33.67
Gene sequence:
>600_bases ATGCTTTACGTTTTAGTTTTAGCATCAATTACATTATTACTTGGATTTTTTCAATTTTATTCATCAATTAGGAACCGAGG CTCCATTTTTTTAAGCTCACTTTTAGTGATTATCCCCCTTGCTGTTGTTATTTTCTCAGCAAGAAATGTGATGGAAACTT CACATAAAAGTTCTGGCTCTAAGACCAACTCAACTTTAATTGCTAGTAAAAAATCGAGCTTGAAGGACGATAAGTTGGAA ATGATTAAAAGCGAAAGTGTTGCCTCTTCATCTAAGGCCCAACAGGTGCAACAAGTCCAGGCTAGTCTTACTAAATCTTT TAAATCGTTTGGTACTGTTACATATGATCCATCTGCCAAAACATTTAGTGTTTCAGCAACCGATAAAGACACTAAAAAAG TTTTCAATCAGTTGATCGAAAATCCTGACCAAATGAGTAATAGTAATTTTAAAGATATCCAAGATAAATTTGTTGAGGTT TCAAAATCCCTCAAAAAAGAACTTGGTAAGGGATATGCCGTTCAATTAAATCAACCTGACAAAAATAAAGCGATGATTAT CGCGAAAGACGGTAAAATTGTTTACAGCATCTTCTCATAA
Upstream 100 bases:
>100_bases ATTTAGAGATAACATCTACTAGATGTGACTTTCCTATTGATTTATTATGTTTTTCAAAGCATACTATTGTTAATGCGATA AATCATTTTGGAGGGTTACT
Downstream 100 bases:
>100_bases AAAATGGCAACTTAGGTTTAAACCCAAGTTGCCATTTTTTTAATTTACTTTTTCATAAATCCGTTGTTGTTGTTGTTGTC CCTTCAAAACAAATGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLYVLVLASITLLLGFFQFYSSIRNRGSIFLSSLLVIIPLAVVIFSARNVMETSHKSSGSKTNSTLIASKKSSLKDDKLE MIKSESVASSSKAQQVQQVQASLTKSFKSFGTVTYDPSAKTFSVSATDKDTKKVFNQLIENPDQMSNSNFKDIQDKFVEV SKSLKKELGKGYAVQLNQPDKNKAMIIAKDGKIVYSIFS
Sequences:
>Translated_199_residues MLYVLVLASITLLLGFFQFYSSIRNRGSIFLSSLLVIIPLAVVIFSARNVMETSHKSSGSKTNSTLIASKKSSLKDDKLE MIKSESVASSSKAQQVQQVQASLTKSFKSFGTVTYDPSAKTFSVSATDKDTKKVFNQLIENPDQMSNSNFKDIQDKFVEV SKSLKKELGKGYAVQLNQPDKNKAMIIAKDGKIVYSIFS >Mature_199_residues MLYVLVLASITLLLGFFQFYSSIRNRGSIFLSSLLVIIPLAVVIFSARNVMETSHKSSGSKTNSTLIASKKSSLKDDKLE MIKSESVASSSKAQQVQQVQASLTKSFKSFGTVTYDPSAKTFSVSATDKDTKKVFNQLIENPDQMSNSNFKDIQDKFVEV SKSLKKELGKGYAVQLNQPDKNKAMIIAKDGKIVYSIFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21946; Mature: 21946
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYVLVLASITLLLGFFQFYSSIRNRGSIFLSSLLVIIPLAVVIFSARNVMETSHKSSGS CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KTNSTLIASKKSSLKDDKLEMIKSESVASSSKAQQVQQVQASLTKSFKSFGTVTYDPSAK CCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC TFSVSATDKDTKKVFNQLIENPDQMSNSNFKDIQDKFVEVSKSLKKELGKGYAVQLNQPD EEEEECCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC KNKAMIIAKDGKIVYSIFS CCCEEEEEECCEEEEEECC >Mature Secondary Structure MLYVLVLASITLLLGFFQFYSSIRNRGSIFLSSLLVIIPLAVVIFSARNVMETSHKSSGS CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KTNSTLIASKKSSLKDDKLEMIKSESVASSSKAQQVQQVQASLTKSFKSFGTVTYDPSAK CCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC TFSVSATDKDTKKVFNQLIENPDQMSNSNFKDIQDKFVEVSKSLKKELGKGYAVQLNQPD EEEEECCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC KNKAMIIAKDGKIVYSIFS CCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA