Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492619
Identifier: 116492619
GI number: 116492619
Start: 858262
End: 858594
Strand: Reverse
Name: 116492619
Synonym: PEPE_0853
Alternate gene names: NA
Gene position: 858594-858262 (Counterclockwise)
Preceding gene: 116492635
Following gene: 116492603
Centisome position: 46.86
GC content: 42.04
Gene sequence:
>333_bases ATGAAAATCATCGTCCATATTGATGAAATGGCAAAGTGGCCAATGGTTTTAAATAATCTAAACCATCTAGCACAAGCTTA TCCTGCTCCCAATAATCAGATTGAGCTCTTAGTCAATGGTGATGCTGTGATGGGCGTTAAAGCCAATAGCAAAGAAGCAG AAAAGATCCGTCACGCTCTTACGTCTCAGATAGTGATTGCAGTTTGTCAAAATTCGTTAACCCAGCGGAAAATTACCACG GAGGATTTGCTTAACAATTCCACCATTGTGGCTTCTGGGGTCGTAGAATTAGTTGAGAAGCAAGCCTTGGGATATCATTA CCTGAGGCCCTAG
Upstream 100 bases:
>100_bases TAACGCGCGTTATCAGTAGCTTAACCAGGATTATTAGCGGTATACTATGATTATCCATTATTCTAATTTTTAATCTTAAT CTACTAAGGAGAATAATTTT
Downstream 100 bases:
>100_bases TAATTACCTAAATGAATTTTTATCCTAAGGAGAAATCATAATGAAAAACGAAATTTTAGTTACAACTACAGAAAAAATTC CTGGACAGGAATATATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKIIVHIDEMAKWPMVLNNLNHLAQAYPAPNNQIELLVNGDAVMGVKANSKEAEKIRHALTSQIVIAVCQNSLTQRKITT EDLLNNSTIVASGVVELVEKQALGYHYLRP
Sequences:
>Translated_110_residues MKIIVHIDEMAKWPMVLNNLNHLAQAYPAPNNQIELLVNGDAVMGVKANSKEAEKIRHALTSQIVIAVCQNSLTQRKITT EDLLNNSTIVASGVVELVEKQALGYHYLRP >Mature_110_residues MKIIVHIDEMAKWPMVLNNLNHLAQAYPAPNNQIELLVNGDAVMGVKANSKEAEKIRHALTSQIVIAVCQNSLTQRKITT EDLLNNSTIVASGVVELVEKQALGYHYLRP
Specific function: Unknown
COG id: COG1416
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12201; Mature: 12201
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIVHIDEMAKWPMVLNNLNHLAQAYPAPNNQIELLVNGDAVMGVKANSKEAEKIRHAL CEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHH TSQIVIAVCQNSLTQRKITTEDLLNNSTIVASGVVELVEKQALGYHYLRP HHHHHHHHHHHHHHHHCCCHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKIIVHIDEMAKWPMVLNNLNHLAQAYPAPNNQIELLVNGDAVMGVKANSKEAEKIRHAL CEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHH TSQIVIAVCQNSLTQRKITTEDLLNNSTIVASGVVELVEKQALGYHYLRP HHHHHHHHHHHHHHHHCCCHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA