Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is prsA
Identifier: 116492445
GI number: 116492445
Start: 718456
End: 719343
Strand: Reverse
Name: prsA
Synonym: PEPE_0677
Alternate gene names: 116492445
Gene position: 719343-718456 (Counterclockwise)
Preceding gene: 116492446
Following gene: 116492435
Centisome position: 39.26
GC content: 35.47
Gene sequence:
>888_bases ATGAAAAAAGTTTTAATTGGTTTTGCCAGTATTGCAATGGCATTTACCTTAGCAGCATGTGGAAATAAGACGGTTGCTAC AACATCGGGTGGTAAAATCACTCAAGACGAATACTACAGCAGCTTGAAGAACACCACTAGTGGTAAGCAAGTTCTTCAAG AAATGATCGTCAACAAAGTTTTAGAAAAACAATATGGTGATAAAGTTTCTAAAAAGACGGTTACTAAGCAATACAACTCA TACAAGGATCAATATGGATCATCATTTAAGAGCATCCTTTCATCTAATGGTATGACAACTTCTTCTTTGAAGACTCAGAT TCGTTCTAATCTGCTATTGAAAGAAGCCGTTAAAGCTAACGATAAGATTTCAAATGCAGACCTTAAGAAAGAATGGAAAT CTTATGAACCAAAGGTTACAGTGGCTCAGATTTTAGTTTCTAAGAAATCAACTGCTGAAGATATTATCAAGAAGCTTAAC GATGGTGGAGATTTCACTAAACTTGCTAAGCAATATTCAACTGATTCTTCAACTAAGAATAAGGGTGGTAAAATTGCTGC CTTTGATGACACAAACTCAACACTGGACTCTTCTTTCAAGAAAGCTGCATTCAAGCTTGATGAAGGTAAATATACAACTA CACCAGTTAAAACTGAATATGGTTACCAAGTGATTAAGATGATTAACAAACCATCTAAGGGTAAGATGTCTGACCATACT AAAGAACTTAAAGAACGTATCTGGAATGCAGATATGAGCGATAGCACAACCTTACGTAGTGTAATCACTAAAGTTCTTAA GAAGGGTAACGTAACTATTAAGGACAAAGACCTTAAGAACGTTCTTGACGATTACCTTGGTAGCTCTGCTAGCTCAAGTA CTAAATAA
Upstream 100 bases:
>100_bases CTTTTTCTAAAGATTAAAGTTGTTTTATTATCATCCATTTAGGTATGGTATGATAGGTTTTGTATTTAACAAATTAAATT GTTAGGATGTGTAGATTGTA
Downstream 100 bases:
>100_bases TGCTAAATAAAAAAGATGAACGATTTCTCGTTCATCTTTTTTATTTGCTTTCTGGTTTATAAAAATTACGTCCATCCATA CCAAAAATTCGTTCACTGAA
Product: peptidylprolyl isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKKVLIGFASIAMAFTLAACGNKTVATTSGGKITQDEYYSSLKNTTSGKQVLQEMIVNKVLEKQYGDKVSKKTVTKQYNS YKDQYGSSFKSILSSNGMTTSSLKTQIRSNLLLKEAVKANDKISNADLKKEWKSYEPKVTVAQILVSKKSTAEDIIKKLN DGGDFTKLAKQYSTDSSTKNKGGKIAAFDDTNSTLDSSFKKAAFKLDEGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHT KELKERIWNADMSDSTTLRSVITKVLKKGNVTIKDKDLKNVLDDYLGSSASSSTK
Sequences:
>Translated_295_residues MKKVLIGFASIAMAFTLAACGNKTVATTSGGKITQDEYYSSLKNTTSGKQVLQEMIVNKVLEKQYGDKVSKKTVTKQYNS YKDQYGSSFKSILSSNGMTTSSLKTQIRSNLLLKEAVKANDKISNADLKKEWKSYEPKVTVAQILVSKKSTAEDIIKKLN DGGDFTKLAKQYSTDSSTKNKGGKIAAFDDTNSTLDSSFKKAAFKLDEGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHT KELKERIWNADMSDSTTLRSVITKVLKKGNVTIKDKDLKNVLDDYLGSSASSSTK >Mature_295_residues MKKVLIGFASIAMAFTLAACGNKTVATTSGGKITQDEYYSSLKNTTSGKQVLQEMIVNKVLEKQYGDKVSKKTVTKQYNS YKDQYGSSFKSILSSNGMTTSSLKTQIRSNLLLKEAVKANDKISNADLKKEWKSYEPKVTVAQILVSKKSTAEDIIKKLN DGGDFTKLAKQYSTDSSTKNKGGKIAAFDDTNSTLDSSFKKAAFKLDEGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHT KELKERIWNADMSDSTTLRSVITKVLKKGNVTIKDKDLKNVLDDYLGSSASSSTK
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PRSA_PEDPA (Q03GD4)
Other databases:
- EMBL: CP000422 - RefSeq: YP_804180.1 - ProteinModelPortal: Q03GD4 - SMR: Q03GD4 - STRING: Q03GD4 - GeneID: 4418142 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_0677 - NMPDR: fig|278197.10.peg.602 - eggNOG: COG0760 - HOGENOM: HBG712792 - OMA: NTYKKQY - ProtClustDB: PRK04405 - BioCyc: PPEN278197:PEPE_0677-MONOMER - HAMAP: MF_01145 - InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR008880
Pfam domain/function: PF00639 Rotamase; SSF109998 Trigger_fac_C_bac
EC number: =5.2.1.8
Molecular weight: Translated: 32507; Mature: 32507
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS01096 PPIC_PPIASE_1; PS50198 PPIC_PPIASE_2; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLIGFASIAMAFTLAACGNKTVATTSGGKITQDEYYSSLKNTTSGKQVLQEMIVNKV CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH LEKQYGDKVSKKTVTKQYNSYKDQYGSSFKSILSSNGMTTSSLKTQIRSNLLLKEAVKAN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC DKISNADLKKEWKSYEPKVTVAQILVSKKSTAEDIIKKLNDGGDFTKLAKQYSTDSSTKN CCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC KGGKIAAFDDTNSTLDSSFKKAAFKLDEGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHT CCCEEEEECCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCHHHH KELKERIWNADMSDSTTLRSVITKVLKKGNVTIKDKDLKNVLDDYLGSSASSSTK HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKVLIGFASIAMAFTLAACGNKTVATTSGGKITQDEYYSSLKNTTSGKQVLQEMIVNKV CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH LEKQYGDKVSKKTVTKQYNSYKDQYGSSFKSILSSNGMTTSSLKTQIRSNLLLKEAVKAN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC DKISNADLKKEWKSYEPKVTVAQILVSKKSTAEDIIKKLNDGGDFTKLAKQYSTDSSTKN CCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC KGGKIAAFDDTNSTLDSSFKKAAFKLDEGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHT CCCEEEEECCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCHHHH KELKERIWNADMSDSTTLRSVITKVLKKGNVTIKDKDLKNVLDDYLGSSASSSTK HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA