Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
---|---|
Accession | NC_008525 |
Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116492446
Identifier: 116492446
GI number: 116492446
Start: 719450
End: 719815
Strand: Reverse
Name: 116492446
Synonym: PEPE_0678
Alternate gene names: NA
Gene position: 719815-719450 (Counterclockwise)
Preceding gene: 116492447
Following gene: 116492445
Centisome position: 39.28
GC content: 33.88
Gene sequence:
>366_bases ATGGCAAAAAAAACTAAGAAGCATTCATGGTTAAAGTGGTCCATCGGAACTTGGGCTGGTTTTAAAGGTGTCGAATATCT TCTTAACCATCCCCATTTCATCCGTGATTTTAAAATATCGATGAAGGAATACTTTACCAATTTAAGTGAATTTGTTGACT CACTTCAAAGTTTAAAGGCTAACTCGGCTCAACTCCAAGTTGAATTAAAAAAAGCTGAGCGAACGGTCAACCAAATTACT AAATCGGTGGATCGCTTTGAATATAAACTCGACCCTCGCATTGAAAAAATTAATGAACTAAAAAAACACATAAATAGCGA AATTGATCATTTACAAGACCAAATCTTGGATAAAAAAAGAAAATGA
Upstream 100 bases:
>100_bases ATGGTTTCAGCATGACCTTTACTGATAACACCGATAAATACAGTTCTGAGGAACTTCAAAAAATCCAAAAAAAGATTACT GATCGTTTAGGTGATTAATT
Downstream 100 bases:
>100_bases TTAAAACTTTTTCTAAAGATTAAAGTTGTTTTATTATCATCCATTTAGGTATGGTATGATAGGTTTTGTATTTAACAAAT TAAATTGTTAGGATGTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAKKTKKHSWLKWSIGTWAGFKGVEYLLNHPHFIRDFKISMKEYFTNLSEFVDSLQSLKANSAQLQVELKKAERTVNQIT KSVDRFEYKLDPRIEKINELKKHINSEIDHLQDQILDKKRK
Sequences:
>Translated_121_residues MAKKTKKHSWLKWSIGTWAGFKGVEYLLNHPHFIRDFKISMKEYFTNLSEFVDSLQSLKANSAQLQVELKKAERTVNQIT KSVDRFEYKLDPRIEKINELKKHINSEIDHLQDQILDKKRK >Mature_120_residues AKKTKKHSWLKWSIGTWAGFKGVEYLLNHPHFIRDFKISMKEYFTNLSEFVDSLQSLKANSAQLQVELKKAERTVNQITK SVDRFEYKLDPRIEKINELKKHINSEIDHLQDQILDKKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14417; Mature: 14286
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTKKHSWLKWSIGTWAGFKGVEYLLNHPHFIRDFKISMKEYFTNLSEFVDSLQSLKA CCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NSAQLQVELKKAERTVNQITKSVDRFEYKLDPRIEKINELKKHINSEIDHLQDQILDKKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC K C >Mature Secondary Structure AKKTKKHSWLKWSIGTWAGFKGVEYLLNHPHFIRDFKISMKEYFTNLSEFVDSLQSLKA CCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NSAQLQVELKKAERTVNQITKSVDRFEYKLDPRIEKINELKKHINSEIDHLQDQILDKKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA