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The map label for this gene is yodM [H]

Identifier: 116492414

GI number: 116492414

Start: 684879

End: 685511

Strand: Reverse

Name: yodM [H]

Synonym: PEPE_0644

Alternate gene names: 116492414

Gene position: 685511-684879 (Counterclockwise)

Preceding gene: 116492418

Following gene: 116492413

Centisome position: 37.41

GC content: 35.55

Gene sequence:

>633_bases
ATGCACAGCAGAAAATATACTCATTTATTAATCAATATTCTACCTACGCTTTTATTTATCTTAATCGTAAGTTTAGTTAT
TTTTAAGCCCAGCTGGGTACACGCCTATGACAACAGCATCAGTAGTCTGGTGCAATCTGTCCGAACGCCTGGATTCAATC
AAGTGGTCAGCATCTATACCCAGCTAGGTAATTCTATTCCTTACATAATTATCAGCTTGATAGTCTGCTTAATTTTAATT
CTAAAGCACCTAAAGAAAGCCGCTTTATTCTTGGCTTGTAATATTGTCCTCGGAAATGGACTTAATCATTTAATTAAACA
AATCATTCAACGCCAACGCCCCGAATTCCGTTTAATCAGTATTGGTGGTTATAGTTTTCCTAGTGGTCATTCAGTGGCGG
CTATGGTTTTATTTGGAAGCCTAATTTTTATCACTTTCCAAGTTGTCCATCATCAATTAAAACGAAACTTACTAGCATTA
ATCTACTTAATTCTAATGCTAGGCATTGGCCTATCCCGAATTTATTTAAACGTTCATTTTCCAACGGATGTTACGGCGGG
ATTCTTACTTGGTTTAATCGTTCTTCAATTTACAACCTATCTCTTTTATGGAAGGAAAATTAAAAATGCTTGA

Upstream 100 bases:

>100_bases
TCTTTTATCGACAATATTTAGTTAGGTTTATCATACCAATCTCCACGCTTCATTACAACTCAATATGCTAAAATTAATTA
TGAAGTTAAAGGAGAAACGT

Downstream 100 bases:

>100_bases
TAATGCCATGCAATACAGTCATCAATTACTAACTGAAATTGTTCAACCCGGCGATGTGGTAATCGATGCCACTATGGGAA
ATGGTCATGACACTTTATTT

Product: membrane-associated phospholipid phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MHSRKYTHLLINILPTLLFILIVSLVIFKPSWVHAYDNSISSLVQSVRTPGFNQVVSIYTQLGNSIPYIIISLIVCLILI
LKHLKKAALFLACNIVLGNGLNHLIKQIIQRQRPEFRLISIGGYSFPSGHSVAAMVLFGSLIFITFQVVHHQLKRNLLAL
IYLILMLGIGLSRIYLNVHFPTDVTAGFLLGLIVLQFTTYLFYGRKIKNA

Sequences:

>Translated_210_residues
MHSRKYTHLLINILPTLLFILIVSLVIFKPSWVHAYDNSISSLVQSVRTPGFNQVVSIYTQLGNSIPYIIISLIVCLILI
LKHLKKAALFLACNIVLGNGLNHLIKQIIQRQRPEFRLISIGGYSFPSGHSVAAMVLFGSLIFITFQVVHHQLKRNLLAL
IYLILMLGIGLSRIYLNVHFPTDVTAGFLLGLIVLQFTTYLFYGRKIKNA
>Mature_210_residues
MHSRKYTHLLINILPTLLFILIVSLVIFKPSWVHAYDNSISSLVQSVRTPGFNQVVSIYTQLGNSIPYIIISLIVCLILI
LKHLKKAALFLACNIVLGNGLNHLIKQIIQRQRPEFRLISIGGYSFPSGHSVAAMVLFGSLIFITFQVVHHQLKRNLLAL
IYLILMLGIGLSRIYLNVHFPTDVTAGFLLGLIVLQFTTYLFYGRKIKNA

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 23670; Mature: 23670

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRKYTHLLINILPTLLFILIVSLVIFKPSWVHAYDNSISSLVQSVRTPGFNQVVSIYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QLGNSIPYIIISLIVCLILILKHLKKAALFLACNIVLGNGLNHLIKQIIQRQRPEFRLIS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
IGGYSFPSGHSVAAMVLFGSLIFITFQVVHHQLKRNLLALIYLILMLGIGLSRIYLNVHF
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEC
PTDVTAGFLLGLIVLQFTTYLFYGRKIKNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSRKYTHLLINILPTLLFILIVSLVIFKPSWVHAYDNSISSLVQSVRTPGFNQVVSIYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QLGNSIPYIIISLIVCLILILKHLKKAALFLACNIVLGNGLNHLIKQIIQRQRPEFRLIS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
IGGYSFPSGHSVAAMVLFGSLIFITFQVVHHQLKRNLLALIYLILMLGIGLSRIYLNVHF
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEC
PTDVTAGFLLGLIVLQFTTYLFYGRKIKNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]