Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is yjeF [C]
Identifier: 116492418
GI number: 116492418
Start: 690915
End: 691754
Strand: Reverse
Name: yjeF [C]
Synonym: PEPE_0648
Alternate gene names: 116492418
Gene position: 691754-690915 (Counterclockwise)
Preceding gene: 116492420
Following gene: 116492414
Centisome position: 37.75
GC content: 40.95
Gene sequence:
>840_bases ATGTTAAAGATTAATCAGGACGGATTGAACAACTTATGGCCCGTCCGTTCCAATGATAGTCACAAAGGAAGTTATGGTCG GATTTTAATCGTAGCTGGTAATGATCAATACGGAGGCGCTGGAATTTTATCAAGTTCAGCGGCAGTTTATGCTGGAGGTG GATTAGTAACCTTAGCAACGGATAAAACTAACTTTACGGCTGTCCGCTCCACTCTAGCCGAAGTTATGTTGCTCGATTTC TTAGATTTTGATGCTTTAAAAGCAGCCCTAAAAAAATCAACGGGAGTGGTAATCGGTCCGGGATTGGGAACTAATGCTAC TAGCTTAAAAATTTTAAAATTTGTCTTAGACCACGTTCAACCCCAAACACCTTTAGTTATTGATGGTTCAGCGATTGATT TGATTGCTACCCATCAAATTCAGGTAGATCATCCCCAAACTATTTTTACTCCTCACCAAATGGAATGGCAACGACTTTCC GGAATAAAGATAGTAGATCAAAACCCCTCGCTAAATCAACGTGCAGTTGACCGTTTAAAAGCAATGGTAGTTCTAAAGCA TTATGAAACTGAAATTTACGCTCCTCACACCGACTTTCGCCAAATTATGGCTGGTAACCCTGGGATGGCAACAGGTGGTT CAGGAGACGCCTTAACTGGAGTAATTATTGCGTTAGTAAACCAAGTCGACTCTTTGGCCTTAGGTGTTACCTTAGGAACC TTCTTACACAGTTATACCGCCGATCAAATTTATCAAAAAGAAGCGGTTGTTTTGCCCCATCGCTTAATTCGTCGTCTCCC CTTCACACTAAAACAACTTCAAAAAAATAAGCTACTATGA
Upstream 100 bases:
>100_bases ATTTAGCGCTTACATAATAGAGTTTTATGCATTTTCTTCGATTTTTATTTTGCATGTTTTATGCTGGTTTGCGATATACT ACCTTTACGAGGTGATTACA
Downstream 100 bases:
>100_bases TTTTTGTCATAGTAGCTTATTTTTAACCTTCAACTAACCGATTAATTTCATCATCCGTTAATTCTCGATAAGTTCCGGGA AGTAATCCCACATCTAATTC
Product: sugar kinase
Products: NA
Alternate protein names: ORF1091 [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDF LDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLS GIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL
Sequences:
>Translated_279_residues MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDF LDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLS GIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL >Mature_279_residues MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDF LDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLS GIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=250, Percent_Identity=32.8, Blast_Score=106, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322698, Length=234, Percent_Identity=27.3504273504274, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI21357759, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 [H]
Pfam domain/function: PF01256 Carb_kinase [H]
EC number: NA
Molecular weight: Translated: 30242; Mature: 30242
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLAT CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCEEEECCCEEEEEE DKTNFTAVRSTLAEVMLLDFLDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQ CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCC PQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLSGIKIVDQNPSLNQRAVDRLK CCCCEEECCCEEEEEEEEEEEECCCCEECCCCCHHHHHCCCCEEEECCCCCCHHHHHHHH AMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT HHHHHHHHCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLAT CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCEEEECCCEEEEEE DKTNFTAVRSTLAEVMLLDFLDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQ CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCC PQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLSGIKIVDQNPSLNQRAVDRLK CCCCEEECCCEEEEEEEEEEEECCCCEECCCCCHHHHHCCCCEEEECCCCCCHHHHHHHH AMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGT HHHHHHHHCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8930919 [H]