| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is glmM
Identifier: 116492279
GI number: 116492279
Start: 528312
End: 529670
Strand: Direct
Name: glmM
Synonym: PEPE_0477
Alternate gene names: 116492279
Gene position: 528312-529670 (Clockwise)
Preceding gene: 116492278
Following gene: 116492280
Centisome position: 28.83
GC content: 40.32
Gene sequence:
>1359_bases ATGAAATTAAAGTATTTTGGTACTGACGGAGTTCGAGGAATTGCAAATGAAACATTGACTCCAGAATTAGCGTTTCAATT AGGCCGTGCTGGTGGTTATGTTTTAACTAAGCATGCTAAAGATGATGAACAACCACGGGTTTTAGTTTCAAGAGATACCC GAATTTCAGGACAATTGTTAAAACATGCATTGATCTCAGGCTTACTTTCAGTCGGCATTGAAGTTATGGACATGGGAATT GTTACAACTCCTGGTGTGGCTTATCTTGTTCGTAAACAAGAAGCTGACGCTGGTGTAATGATTACTGCTTCACATAATCC GGTTCAAGATAACGGAATCAAGTTCTTTGGTTCAGATGGTTACAAGCTATCAGATGAACTTGAAGCTGAAATCGAAGTAC TTTTAGATGCTGATAAAGACAACTTACCTCGTCCTTCATCTACTGGACTAGGTTCAGTGACTGATTATCCAGAAGGTGGA TTAAACTATACGGCCTTTCTTGAACAAACTATTCCCGATGACTTGGAAGGTTTGCATATCGCAATTGATGCTGCTAATGG AGCAACCAGTAGCTACGTTTCACAAATATTTGCGGACTTAAATACTGAGTTTGATACGATGGCAACAAATCCAGATGGTT TGAACATCAACGCTGGAGTTGGTTCTACTCATCCTGAAGGATTGGCTAAGTTTGTGGTCGAAAAAGGCGCTGATATGGGA GTTGCTTTTGATGGCGATGGAGACCGTTGTATTGCCGTTGATGAATTAGGTAATATCGTTGACGGTGACAAGATTATGTA TATCTGTGGTAAATTCTTGAGCGAACGCGGACGTTTGAAAGACGATACTGTGGTTACAACCGTGATGAGTAATCTAGGAC TATATAAGGCTCTAGAAGCTAATGATATGCACTCGGTTAAGACCCAAGTTGGTGACCGCTATGTGGTTGAAGAAATGCTT AAAGACGGATATAACCTTGGTGGTGAACAGTCCGGACACATTGTCTTCTTAGACCACAATACTACTGGAGATGGTATGTT AACCGCCATTCAATTGATGTACGTGGTTAAACAAACTGGTAAAAAGTTGTCTGAGTTAGCTGCTGATGTGACAACTTACC CTCAAAAATTAGTTAACGTTCGAGTACAAGATAAGAAGCTAGCACTTGAAAATCAAGCAATTAAAGATATCATTGAAAAA GTTGAAAATGAAATGAACGGTGAAGGTCGAGTTCTAGTGCGCCCTTCAGGGACTGAAGACCTACTTCGTATTATGGCCGA AGCTCCTACAAAAGAAGCAGTTGGTCAATATGTTGATCGAATTGTTGCTGTAGTTCAAAGTGAAGTTGGCGTGGATTAA
Upstream 100 bases:
>100_bases TCAAACGACCTCAGATAGTGCAACTTCCGACAGTACAAGCACATCTGATGCTAGCGGAAACACAGATACACAGGTGAATT AACAAAGGAGATTATTAACA
Downstream 100 bases:
>100_bases TTAGTTGAATTCAACTTCTACAACTGAATAAATTTAAAAAACTATGCTATTTTGCAAAAAATGGCATAGTTTTTTTATAC GCGAAAAGCATTGCTACTAT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKLKYFGTDGVRGIANETLTPELAFQLGRAGGYVLTKHAKDDEQPRVLVSRDTRISGQLLKHALISGLLSVGIEVMDMGI VTTPGVAYLVRKQEADAGVMITASHNPVQDNGIKFFGSDGYKLSDELEAEIEVLLDADKDNLPRPSSTGLGSVTDYPEGG LNYTAFLEQTIPDDLEGLHIAIDAANGATSSYVSQIFADLNTEFDTMATNPDGLNINAGVGSTHPEGLAKFVVEKGADMG VAFDGDGDRCIAVDELGNIVDGDKIMYICGKFLSERGRLKDDTVVTTVMSNLGLYKALEANDMHSVKTQVGDRYVVEEML KDGYNLGGEQSGHIVFLDHNTTGDGMLTAIQLMYVVKQTGKKLSELAADVTTYPQKLVNVRVQDKKLALENQAIKDIIEK VENEMNGEGRVLVRPSGTEDLLRIMAEAPTKEAVGQYVDRIVAVVQSEVGVD
Sequences:
>Translated_452_residues MKLKYFGTDGVRGIANETLTPELAFQLGRAGGYVLTKHAKDDEQPRVLVSRDTRISGQLLKHALISGLLSVGIEVMDMGI VTTPGVAYLVRKQEADAGVMITASHNPVQDNGIKFFGSDGYKLSDELEAEIEVLLDADKDNLPRPSSTGLGSVTDYPEGG LNYTAFLEQTIPDDLEGLHIAIDAANGATSSYVSQIFADLNTEFDTMATNPDGLNINAGVGSTHPEGLAKFVVEKGADMG VAFDGDGDRCIAVDELGNIVDGDKIMYICGKFLSERGRLKDDTVVTTVMSNLGLYKALEANDMHSVKTQVGDRYVVEEML KDGYNLGGEQSGHIVFLDHNTTGDGMLTAIQLMYVVKQTGKKLSELAADVTTYPQKLVNVRVQDKKLALENQAIKDIIEK VENEMNGEGRVLVRPSGTEDLLRIMAEAPTKEAVGQYVDRIVAVVQSEVGVD >Mature_452_residues MKLKYFGTDGVRGIANETLTPELAFQLGRAGGYVLTKHAKDDEQPRVLVSRDTRISGQLLKHALISGLLSVGIEVMDMGI VTTPGVAYLVRKQEADAGVMITASHNPVQDNGIKFFGSDGYKLSDELEAEIEVLLDADKDNLPRPSSTGLGSVTDYPEGG LNYTAFLEQTIPDDLEGLHIAIDAANGATSSYVSQIFADLNTEFDTMATNPDGLNINAGVGSTHPEGLAKFVVEKGADMG VAFDGDGDRCIAVDELGNIVDGDKIMYICGKFLSERGRLKDDTVVTTVMSNLGLYKALEANDMHSVKTQVGDRYVVEEML KDGYNLGGEQSGHIVFLDHNTTGDGMLTAIQLMYVVKQTGKKLSELAADVTTYPQKLVNVRVQDKKLALENQAIKDIIEK VENEMNGEGRVLVRPSGTEDLLRIMAEAPTKEAVGQYVDRIVAVVQSEVGVD
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=448, Percent_Identity=39.7321428571429, Blast_Score=309, Evalue=2e-85, Organism=Escherichia coli, GI1788361, Length=454, Percent_Identity=27.0925110132159, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_PEDPA (Q03GV0)
Other databases:
- EMBL: CP000422 - RefSeq: YP_804014.1 - ProteinModelPortal: Q03GV0 - SMR: Q03GV0 - STRING: Q03GV0 - GeneID: 4418340 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_0477 - NMPDR: fig|278197.10.peg.444 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: EEAGINS - PhylomeDB: Q03GV0 - ProtClustDB: PRK14316 - BioCyc: PPEN278197:PEPE_0477-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR018247 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48781; Mature: 48781
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00710 PGM_PMM; PS00018 EF_HAND_1
Important sites: ACT_SITE 104-104
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKYFGTDGVRGIANETLTPELAFQLGRAGGYVLTKHAKDDEQPRVLVSRDTRISGQLL CEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHH KHALISGLLSVGIEVMDMGIVTTPGVAYLVRKQEADAGVMITASHNPVQDNGIKFFGSDG HHHHHHHHHHHCHHHEECCEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCC YKLSDELEAEIEVLLDADKDNLPRPSSTGLGSVTDYPEGGLNYTAFLEQTIPDDLEGLHI CEECHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE AIDAANGATSSYVSQIFADLNTEFDTMATNPDGLNINAGVGSTHPEGLAKFVVEKGADMG EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC VAFDGDGDRCIAVDELGNIVDGDKIMYICGKFLSERGRLKDDTVVTTVMSNLGLYKALEA EEECCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCC NDMHSVKTQVGDRYVVEEMLKDGYNLGGEQSGHIVFLDHNTTGDGMLTAIQLMYVVKQTG CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH KKLSELAADVTTYPQKLVNVRVQDKKLALENQAIKDIIEKVENEMNGEGRVLVRPSGTED HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHH LLRIMAEAPTKEAVGQYVDRIVAVVQSEVGVD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLKYFGTDGVRGIANETLTPELAFQLGRAGGYVLTKHAKDDEQPRVLVSRDTRISGQLL CEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHH KHALISGLLSVGIEVMDMGIVTTPGVAYLVRKQEADAGVMITASHNPVQDNGIKFFGSDG HHHHHHHHHHHCHHHEECCEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCC YKLSDELEAEIEVLLDADKDNLPRPSSTGLGSVTDYPEGGLNYTAFLEQTIPDDLEGLHI CEECHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE AIDAANGATSSYVSQIFADLNTEFDTMATNPDGLNINAGVGSTHPEGLAKFVVEKGADMG EEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC VAFDGDGDRCIAVDELGNIVDGDKIMYICGKFLSERGRLKDDTVVTTVMSNLGLYKALEA EEECCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCC NDMHSVKTQVGDRYVVEEMLKDGYNLGGEQSGHIVFLDHNTTGDGMLTAIQLMYVVKQTG CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH KKLSELAADVTTYPQKLVNVRVQDKKLALENQAIKDIIEKVENEMNGEGRVLVRPSGTED HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHH LLRIMAEAPTKEAVGQYVDRIVAVVQSEVGVD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA