| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is ackA [H]
Identifier: 116492139
GI number: 116492139
Start: 384056
End: 385255
Strand: Direct
Name: ackA [H]
Synonym: PEPE_0336
Alternate gene names: 116492139
Gene position: 384056-385255 (Clockwise)
Preceding gene: 116492138
Following gene: 116492140
Centisome position: 20.96
GC content: 36.42
Gene sequence:
>1200_bases TTGGAAAAGACAATTGCAATCAATGCGGGAAGCTCAACCCTTAAGTTTAAATTATTTGAAATGCCGGAAGAAAAGGTTAT TTCATCAGGAACTGTCGATCGGATCGGTATTCCAGGATCAAACTTCACGATTAAGACCACTGATGGTAAAAAAGTTGAAA TTGACCAACCAATTAAAAATCATGAAGAAGCAGTTAATTTACTCTTAAAAGAGCTATTAAAATTAGATATTATTAAAGAT TACAGTGAAATTACCGGTGTAGGACACCGAGTAGTTGCGGGTGGAGAAATTTTCCAAGATTCTGCTTTAATTGATGACAA AGTCTTAAAGCAAATCGAAGACTTAAAAGAATATGCGCCTTTGCATAATCCAGCTAACGCTACAGGAATCCGTGCTTTCA AGAAGGTTTTACCAGATATCACTAGTGTGGCAGTTTTTGATACATCTTTCCATGAAACGTTACCTGAAAAAAATTATCTT TACAGTATTCCTTATGAATACTATGAAAAATATGGGGCTCGTAAATACGGTGCTCATGGTACTAGTCATCAATATGTAGC AGGTCGTGCGGCTAAGATGATGGGCAAGCCATTAGAAGAACTAAAAATAATCACCTTACATTTAGGGGCTGGTAGTTCAA TTACAGCTATCAAGGATGGAAAATCATTTGATACATCAATGGGCTTTACACCTCTAGCAGGGATTACTATGGCAACCCGT TCTGGTGATATTGATGCCTCTTTAGTAGTTTACTTAATGCAAAAACTTAATATTACTAATCCGGAAGACATCTTAACTAT TTTGAATAAGAAGTCTGGTTTGCTAGGACTATCAGGAATGTCACCTGATTTGCGTGATATAATTGATGCCGCTGAAAAAG GTGAACATCGTGCACAAATGGCCATCGATATTTTTGTTAATAATATTGTGAAATACATTGGTTCCTATGCAACTGAAATG GGTGGTTTAGATGGAATTGTATTTACAGCAGGAATTGGTGAAAATAGTGTTCCAATGCGTGAAAAAATTACTTCTAAATT AGGAATTTTCAATGTTAAACTTGACCAAGCGCTTAATGAAAAACGTGGAGAACGTTTCATTAGTGCGGAAGACTCGGCTG TCCAAGTCATGGTAATTCCAACTGATGAAGAATTGGCGATTGCTCGCGATGTTGAAAAGTTTAAAAAAATGGGGGACTAA
Upstream 100 bases:
>100_bases AAATAATAATATTTAAAAATTCTAACGATGAATTTTACAAGCTTACAAACAGATAATACGTTACAATAAGCTATTATTAT GAGAGAAGGAGCTATTTAAG
Downstream 100 bases:
>100_bases CTCATGGATTTATTTGAAGGTTTGAAGTCAAAAATTAAGGGCCAAAATAGAACAGTTGTATTTCCCGAAGGTGAAGATGT TCGAGTTTTAGCTGCCGCTA
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MEKTIAINAGSSTLKFKLFEMPEEKVISSGTVDRIGIPGSNFTIKTTDGKKVEIDQPIKNHEEAVNLLLKELLKLDIIKD YSEITGVGHRVVAGGEIFQDSALIDDKVLKQIEDLKEYAPLHNPANATGIRAFKKVLPDITSVAVFDTSFHETLPEKNYL YSIPYEYYEKYGARKYGAHGTSHQYVAGRAAKMMGKPLEELKIITLHLGAGSSITAIKDGKSFDTSMGFTPLAGITMATR SGDIDASLVVYLMQKLNITNPEDILTILNKKSGLLGLSGMSPDLRDIIDAAEKGEHRAQMAIDIFVNNIVKYIGSYATEM GGLDGIVFTAGIGENSVPMREKITSKLGIFNVKLDQALNEKRGERFISAEDSAVQVMVIPTDEELAIARDVEKFKKMGD
Sequences:
>Translated_399_residues MEKTIAINAGSSTLKFKLFEMPEEKVISSGTVDRIGIPGSNFTIKTTDGKKVEIDQPIKNHEEAVNLLLKELLKLDIIKD YSEITGVGHRVVAGGEIFQDSALIDDKVLKQIEDLKEYAPLHNPANATGIRAFKKVLPDITSVAVFDTSFHETLPEKNYL YSIPYEYYEKYGARKYGAHGTSHQYVAGRAAKMMGKPLEELKIITLHLGAGSSITAIKDGKSFDTSMGFTPLAGITMATR SGDIDASLVVYLMQKLNITNPEDILTILNKKSGLLGLSGMSPDLRDIIDAAEKGEHRAQMAIDIFVNNIVKYIGSYATEM GGLDGIVFTAGIGENSVPMREKITSKLGIFNVKLDQALNEKRGERFISAEDSAVQVMVIPTDEELAIARDVEKFKKMGD >Mature_399_residues MEKTIAINAGSSTLKFKLFEMPEEKVISSGTVDRIGIPGSNFTIKTTDGKKVEIDQPIKNHEEAVNLLLKELLKLDIIKD YSEITGVGHRVVAGGEIFQDSALIDDKVLKQIEDLKEYAPLHNPANATGIRAFKKVLPDITSVAVFDTSFHETLPEKNYL YSIPYEYYEKYGARKYGAHGTSHQYVAGRAAKMMGKPLEELKIITLHLGAGSSITAIKDGKSFDTSMGFTPLAGITMATR SGDIDASLVVYLMQKLNITNPEDILTILNKKSGLLGLSGMSPDLRDIIDAAEKGEHRAQMAIDIFVNNIVKYIGSYATEM GGLDGIVFTAGIGENSVPMREKITSKLGIFNVKLDQALNEKRGERFISAEDSAVQVMVIPTDEELAIARDVEKFKKMGD
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI145693184, Length=398, Percent_Identity=40.2010050251256, Blast_Score=308, Evalue=3e-85, Organism=Escherichia coli, GI1788633, Length=396, Percent_Identity=41.9191919191919, Blast_Score=303, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 43741; Mature: 43741
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS01075 ACETATE_KINASE_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTIAINAGSSTLKFKLFEMPEEKVISSGTVDRIGIPGSNFTIKTTDGKKVEIDQPIKN CCCEEEEECCCCEEEEEEECCCHHHHHCCCCCCEECCCCCCEEEEECCCCEEEECCCCCH HEEAVNLLLKELLKLDIIKDYSEITGVGHRVVAGGEIFQDSALIDDKVLKQIEDLKEYAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHCC LHNPANATGIRAFKKVLPDITSVAVFDTSFHETLPEKNYLYSIPYEYYEKYGARKYGAHG CCCCCCCHHHHHHHHHCCCHHHEEEECCHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCC TSHQYVAGRAAKMMGKPLEELKIITLHLGAGSSITAIKDGKSFDTSMGFTPLAGITMATR CCCCHHHHHHHHHHCCCHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEC SGDIDASLVVYLMQKLNITNPEDILTILNKKSGLLGLSGMSPDLRDIIDAAEKGEHRAQM CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHH AIDIFVNNIVKYIGSYATEMGGLDGIVFTAGIGENSVPMREKITSKLGIFNVKLDQALNE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCEEEEEHHHHHHH KRGERFISAEDSAVQVMVIPTDEELAIARDVEKFKKMGD HHCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKTIAINAGSSTLKFKLFEMPEEKVISSGTVDRIGIPGSNFTIKTTDGKKVEIDQPIKN CCCEEEEECCCCEEEEEEECCCHHHHHCCCCCCEECCCCCCEEEEECCCCEEEECCCCCH HEEAVNLLLKELLKLDIIKDYSEITGVGHRVVAGGEIFQDSALIDDKVLKQIEDLKEYAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHCC LHNPANATGIRAFKKVLPDITSVAVFDTSFHETLPEKNYLYSIPYEYYEKYGARKYGAHG CCCCCCCHHHHHHHHHCCCHHHEEEECCHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCC TSHQYVAGRAAKMMGKPLEELKIITLHLGAGSSITAIKDGKSFDTSMGFTPLAGITMATR CCCCHHHHHHHHHHCCCHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEC SGDIDASLVVYLMQKLNITNPEDILTILNKKSGLLGLSGMSPDLRDIIDAAEKGEHRAQM CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHH AIDIFVNNIVKYIGSYATEMGGLDGIVFTAGIGENSVPMREKITSKLGIFNVKLDQALNE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCEEEEEHHHHHHH KRGERFISAEDSAVQVMVIPTDEELAIARDVEKFKKMGD HHCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]