| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is pbuG [H]
Identifier: 116492107
GI number: 116492107
Start: 348602
End: 349909
Strand: Direct
Name: pbuG [H]
Synonym: PEPE_0303
Alternate gene names: 116492107
Gene position: 348602-349909 (Clockwise)
Preceding gene: 116492106
Following gene: 116492108
Centisome position: 19.02
GC content: 39.76
Gene sequence:
>1308_bases TTGAAACAAATCGCTAAGTATTTTCAATTTGATAAATTGAAAACAAACTATAAAACAGAAATTATTGCTGGGATTACTAC TTATATTTCAATGGTCTACATTATGTTCGTTAATCCGAACGTTTTAGGAGCATCTGGGATGGATAAGGGAGCGGTCTTCA CCGCAACAGCATTGGCTAGTGCCATTGGTTGTTTCCTGATGGGGATTATCGCTAATTACCCAATTGCTTCAGCACCTGCT TTAGGAATTAATGCATTCTTCGCTTATTCCGTGGTTATTGGGATGCATGTGCCTTGGCAAACGGCTTTGGCGGGCGTTTT CGTAGCTTCCTTAATCTTTGTTTTAATCACCGTTTTTAAACTACGAGAATTAATTATTAATGCGATTCCAGTCGATTTGA AGCATGCTATTTCTTCAGGAATTGGATTGTTCGTGGCTTTTCTAGGTTTGAGCCAAGGTGGAATTGTGGTTGCTAACAAA TCTACGATGGTTGGATTAGGTTCATTCTTAGTTCCTTCCACATGGTTGACCGTCTTTGGGTTGGTTGTGACAATTTTCTT GATGGTTCGCAAGGTGCCAGGGGCTATTTTCGTGGGAATGATTTTAACAACCGTCTTTGGTTTATTGACTGGTTTAATTC ATGCACCAGCACACATTGTTTCAGCTGCACCAAGCTTGAAACCAACTTTCTTGACAGCTATTTCACATGTTGGGGATATT AATACTCTCCAACTTTGGGTAGTAGTCTTGACTTTCTTGCTGGTAACGTTCTTTGATACAGCCGGCACATTGGTTGGTTT GGCTACTCAAGCAGGATTTATGAAAGACAATAAGATGCCGCGCGTAGGGAAGGCATTGATGTCTGATTCAGCTTCAATGT TGACTGGATCATTATTAGGTACTTCTCCAGTGGGGGCTTTCGTTGAGTCTTCAGCTGGGATTGCTGTAGGTGGACGTTCT GGCTTTACTGTAGTTGTGACAGGAATTATGTTCCTATTAGGACTCTTCTTCTCACCATTGTTAACCGTCGTTACTTCACA AGTTACCGCACCTGCATTAGTGATTGTGGGGGTATTAATGGCTCAACAAACTCGTGAAATTGCTTGGGATAAATTAGAAA TTGCTATTCCAGCTTTCTTAATTATCATTGGAATGCCATTAACATATAGTATTTCAGATGGGATTGCATTAGGATTTATT ACTTACCCCATTGCCATGATTGCTGCTAAACGTGGCAAAGAAGTTCATCCATTAATGTACGCACTATTCTTTGTATTTAT TGGTTTTATTGCTATTTTAAATGCATAA
Upstream 100 bases:
>100_bases AATAATCAATTTATGGCGTTCTTTACTTATATTTTAAATTAGTGTAGACTTTATTGGTGCTATTTTTGATTTAGATTCGA ACTAAAAGGGAGAAATGATT
Downstream 100 bases:
>100_bases GTATAAAGTTTGAAAATAATCATTTATAATAAGAGCTATGCTTTAAGGCAGTTGGATTAAAATAAAAATTCAACCCTTGG ACATAGTTCTTTTTTTAATT
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKQIAKYFQFDKLKTNYKTEIIAGITTYISMVYIMFVNPNVLGASGMDKGAVFTATALASAIGCFLMGIIANYPIASAPA LGINAFFAYSVVIGMHVPWQTALAGVFVASLIFVLITVFKLRELIINAIPVDLKHAISSGIGLFVAFLGLSQGGIVVANK STMVGLGSFLVPSTWLTVFGLVVTIFLMVRKVPGAIFVGMILTTVFGLLTGLIHAPAHIVSAAPSLKPTFLTAISHVGDI NTLQLWVVVLTFLLVTFFDTAGTLVGLATQAGFMKDNKMPRVGKALMSDSASMLTGSLLGTSPVGAFVESSAGIAVGGRS GFTVVVTGIMFLLGLFFSPLLTVVTSQVTAPALVIVGVLMAQQTREIAWDKLEIAIPAFLIIIGMPLTYSISDGIALGFI TYPIAMIAAKRGKEVHPLMYALFFVFIGFIAILNA
Sequences:
>Translated_435_residues MKQIAKYFQFDKLKTNYKTEIIAGITTYISMVYIMFVNPNVLGASGMDKGAVFTATALASAIGCFLMGIIANYPIASAPA LGINAFFAYSVVIGMHVPWQTALAGVFVASLIFVLITVFKLRELIINAIPVDLKHAISSGIGLFVAFLGLSQGGIVVANK STMVGLGSFLVPSTWLTVFGLVVTIFLMVRKVPGAIFVGMILTTVFGLLTGLIHAPAHIVSAAPSLKPTFLTAISHVGDI NTLQLWVVVLTFLLVTFFDTAGTLVGLATQAGFMKDNKMPRVGKALMSDSASMLTGSLLGTSPVGAFVESSAGIAVGGRS GFTVVVTGIMFLLGLFFSPLLTVVTSQVTAPALVIVGVLMAQQTREIAWDKLEIAIPAFLIIIGMPLTYSISDGIALGFI TYPIAMIAAKRGKEVHPLMYALFFVFIGFIAILNA >Mature_435_residues MKQIAKYFQFDKLKTNYKTEIIAGITTYISMVYIMFVNPNVLGASGMDKGAVFTATALASAIGCFLMGIIANYPIASAPA LGINAFFAYSVVIGMHVPWQTALAGVFVASLIFVLITVFKLRELIINAIPVDLKHAISSGIGLFVAFLGLSQGGIVVANK STMVGLGSFLVPSTWLTVFGLVVTIFLMVRKVPGAIFVGMILTTVFGLLTGLIHAPAHIVSAAPSLKPTFLTAISHVGDI NTLQLWVVVLTFLLVTFFDTAGTLVGLATQAGFMKDNKMPRVGKALMSDSASMLTGSLLGTSPVGAFVESSAGIAVGGRS GFTVVVTGIMFLLGLFFSPLLTVVTSQVTAPALVIVGVLMAQQTREIAWDKLEIAIPAFLIIIGMPLTYSISDGIALGFI TYPIAMIAAKRGKEVHPLMYALFFVFIGFIAILNA
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=417, Percent_Identity=41.4868105515587, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI1790150, Length=436, Percent_Identity=41.743119266055, Blast_Score=319, Evalue=2e-88, Organism=Escherichia coli, GI48994909, Length=420, Percent_Identity=34.7619047619048, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1790499, Length=425, Percent_Identity=33.6470588235294, Blast_Score=201, Evalue=8e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45981; Mature: 45981
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIAKYFQFDKLKTNYKTEIIAGITTYISMVYIMFVNPNVLGASGMDKGAVFTATALAS CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCEECCCCCCCCHHHHHHHHHH AIGCFLMGIIANYPIASAPALGINAFFAYSVVIGMHVPWQTALAGVFVASLIFVLITVFK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LRELIINAIPVDLKHAISSGIGLFVAFLGLSQGGIVVANKSTMVGLGSFLVPSTWLTVFG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH LVVTIFLMVRKVPGAIFVGMILTTVFGLLTGLIHAPAHIVSAAPSLKPTFLTAISHVGDI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC NTLQLWVVVLTFLLVTFFDTAGTLVGLATQAGFMKDNKMPRVGKALMSDSASMLTGSLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHCC TSPVGAFVESSAGIAVGGRSGFTVVVTGIMFLLGLFFSPLLTVVTSQVTAPALVIVGVLM CCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQQTREIAWDKLEIAIPAFLIIIGMPLTYSISDGIALGFITYPIAMIAAKRGKEVHPLMY HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH ALFFVFIGFIAILNA HHHHHHHHHHHHHCC >Mature Secondary Structure MKQIAKYFQFDKLKTNYKTEIIAGITTYISMVYIMFVNPNVLGASGMDKGAVFTATALAS CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCEECCCCCCCCHHHHHHHHHH AIGCFLMGIIANYPIASAPALGINAFFAYSVVIGMHVPWQTALAGVFVASLIFVLITVFK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LRELIINAIPVDLKHAISSGIGLFVAFLGLSQGGIVVANKSTMVGLGSFLVPSTWLTVFG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH LVVTIFLMVRKVPGAIFVGMILTTVFGLLTGLIHAPAHIVSAAPSLKPTFLTAISHVGDI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC NTLQLWVVVLTFLLVTFFDTAGTLVGLATQAGFMKDNKMPRVGKALMSDSASMLTGSLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHCC TSPVGAFVESSAGIAVGGRSGFTVVVTGIMFLLGLFFSPLLTVVTSQVTAPALVIVGVLM CCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQQTREIAWDKLEIAIPAFLIIIGMPLTYSISDGIALGFITYPIAMIAAKRGKEVHPLMY HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH ALFFVFIGFIAILNA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 11591660 [H]