| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is ansA [H]
Identifier: 116492105
GI number: 116492105
Start: 345478
End: 346449
Strand: Direct
Name: ansA [H]
Synonym: PEPE_0301
Alternate gene names: 116492105
Gene position: 345478-346449 (Clockwise)
Preceding gene: 116492103
Following gene: 116492106
Centisome position: 18.85
GC content: 38.99
Gene sequence:
>972_bases ATGAAGAAAATACTAGCATTACATACAGGTGGAACGATTTCGATGTCTGCCAGCAATGATACTGTTAAAACTAATGAACA AAACCCATTACTAGATAGCCAATTTATCAACAAAAATATTGACCTAGTTAATGAAGTGATTTTGAATAAACCTTCAGAAC ACATTACGCCAGATGATATGTTAATTATTAAAAAAAGGGTCAAAAAGGCACTAGATAACAATGAGTGTGATGGCATTGTA ATCACGCACGGAACGGATACCTTGGAAGAAACTGCGTACTTTTTAGATTTAACGATCGAAAATAAAATTCCAGTTGTGCT AACGGGGGCCATGCGCTCTTCCAACGAACTAGGTTCGGATGGTGTGTATAATTTCCAAAGTGCAATTCTGACGGCTGCTT CTGATGAAGCCAGTGATAAAGGGGTTTTAGTGGTCATGAATGATGAGATCCATACTGCCCGTTTTGTTACGAAAACCCAT ACTACTAATGTAGATACGTTTAGAACCCCAACTTTTGGGCCGCTCGGAATTGTTTATAAACGGGATATCCGATTCTTTCA AGCTTTAGTTAATCAGCATGTTTGTGATATTGACCACCTTGAAAAAGGAGTCTATTTAATTAAAGCTTACGCAGGAATCC CTAAAGAAATATTTGAAATTATTAATCGCCCAGGGACCAAGGGGATTGTAATTGAAGGGCTAGGAGCTGGAAATCTACCA GTAGAAGTAGTCGAGCCCATTCAAGCATTAATTGATAATGATATTACGGTTGTAATGGTTTCACGTTGTTACAATGGCTT GGCCGAACCCATCTACGATTATGTGGGCGGCGGAATTGATTTAGAGAGAATGGGCGTTGTATTCTGCCAAGGTCTCAATG GTCAAAAAGCACGTATTAAGTTACAAGTGGCAGTAAGTGCTGGTATGAATTCCAAAGATATTGCTAAGTATATGCATGAC GCGGTGTCATAG
Upstream 100 bases:
>100_bases CCTCTGAATTAATAGAATTATTTTAACGCATTTTGAGGAGCTGTAAATAGCCAAGAAAATGATATGATATGAATAACTAA TAATAAAGAGGAATTTGATA
Downstream 100 bases:
>100_bases AAGTAGATAAGAGTATAATACAGAGTTAATAAATTTTGAAAGTGAGGAATTAGAATGCCAAGTTCAATTAAAGACGATTT TTATGATGCAGTGAATGGTG
Product: asparaginase
Products: NA
Alternate protein names: L-ASNase; L-asparagine amidohydrolase [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKKILALHTGGTISMSASNDTVKTNEQNPLLDSQFINKNIDLVNEVILNKPSEHITPDDMLIIKKRVKKALDNNECDGIV ITHGTDTLEETAYFLDLTIENKIPVVLTGAMRSSNELGSDGVYNFQSAILTAASDEASDKGVLVVMNDEIHTARFVTKTH TTNVDTFRTPTFGPLGIVYKRDIRFFQALVNQHVCDIDHLEKGVYLIKAYAGIPKEIFEIINRPGTKGIVIEGLGAGNLP VEVVEPIQALIDNDITVVMVSRCYNGLAEPIYDYVGGGIDLERMGVVFCQGLNGQKARIKLQVAVSAGMNSKDIAKYMHD AVS
Sequences:
>Translated_323_residues MKKILALHTGGTISMSASNDTVKTNEQNPLLDSQFINKNIDLVNEVILNKPSEHITPDDMLIIKKRVKKALDNNECDGIV ITHGTDTLEETAYFLDLTIENKIPVVLTGAMRSSNELGSDGVYNFQSAILTAASDEASDKGVLVVMNDEIHTARFVTKTH TTNVDTFRTPTFGPLGIVYKRDIRFFQALVNQHVCDIDHLEKGVYLIKAYAGIPKEIFEIINRPGTKGIVIEGLGAGNLP VEVVEPIQALIDNDITVVMVSRCYNGLAEPIYDYVGGGIDLERMGVVFCQGLNGQKARIKLQVAVSAGMNSKDIAKYMHD AVS >Mature_323_residues MKKILALHTGGTISMSASNDTVKTNEQNPLLDSQFINKNIDLVNEVILNKPSEHITPDDMLIIKKRVKKALDNNECDGIV ITHGTDTLEETAYFLDLTIENKIPVVLTGAMRSSNELGSDGVYNFQSAILTAASDEASDKGVLVVMNDEIHTARFVTKTH TTNVDTFRTPTFGPLGIVYKRDIRFFQALVNQHVCDIDHLEKGVYLIKAYAGIPKEIFEIINRPGTKGIVIEGLGAGNLP VEVVEPIQALIDNDITVVMVSRCYNGLAEPIYDYVGGGIDLERMGVVFCQGLNGQKARIKLQVAVSAGMNSKDIAKYMHD AVS
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=299, Percent_Identity=23.7458193979933, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1789327, Length=279, Percent_Identity=35.4838709677419, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1788065, Length=347, Percent_Identity=27.9538904899135, Blast_Score=89, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17558280, Length=338, Percent_Identity=26.3313609467456, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17558278, Length=338, Percent_Identity=26.3313609467456, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193207372, Length=338, Percent_Identity=26.0355029585799, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193207374, Length=338, Percent_Identity=26.3313609467456, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6320527, Length=329, Percent_Identity=31.0030395136778, Blast_Score=123, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323189, Length=325, Percent_Identity=29.5384615384615, Blast_Score=122, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323187, Length=325, Percent_Identity=29.5384615384615, Blast_Score=122, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323186, Length=325, Percent_Identity=29.5384615384615, Blast_Score=122, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323184, Length=325, Percent_Identity=29.5384615384615, Blast_Score=122, Evalue=6e-29, Organism=Drosophila melanogaster, GI24645530, Length=249, Percent_Identity=31.3253012048193, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24639609, Length=275, Percent_Identity=26.1818181818182, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 35365; Mature: 35365
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILALHTGGTISMSASNDTVKTNEQNPLLDSQFINKNIDLVNEVILNKPSEHITPDDM CCCEEEEECCCEEEEECCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHH LIIKKRVKKALDNNECDGIVITHGTDTLEETAYFLDLTIENKIPVVLTGAMRSSNELGSD HHHHHHHHHHHCCCCCCEEEEECCCCCHHHCEEEEEEEECCCCCEEEECCCCCCCCCCCC GVYNFQSAILTAASDEASDKGVLVVMNDEIHTARFVTKTHTTNVDTFRTPTFGPLGIVYK CCHHHHHHHEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEH RDIRFFQALVNQHVCDIDHLEKGVYLIKAYAGIPKEIFEIINRPGTKGIVIEGLGAGNLP HHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCC VEVVEPIQALIDNDITVVMVSRCYNGLAEPIYDYVGGGIDLERMGVVFCQGLNGQKARIK HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCEEEE LQVAVSAGMNSKDIAKYMHDAVS EEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MKKILALHTGGTISMSASNDTVKTNEQNPLLDSQFINKNIDLVNEVILNKPSEHITPDDM CCCEEEEECCCEEEEECCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHH LIIKKRVKKALDNNECDGIVITHGTDTLEETAYFLDLTIENKIPVVLTGAMRSSNELGSD HHHHHHHHHHHCCCCCCEEEEECCCCCHHHCEEEEEEEECCCCCEEEECCCCCCCCCCCC GVYNFQSAILTAASDEASDKGVLVVMNDEIHTARFVTKTHTTNVDTFRTPTFGPLGIVYK CCHHHHHHHEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEH RDIRFFQALVNQHVCDIDHLEKGVYLIKAYAGIPKEIFEIINRPGTKGIVIEGLGAGNLP HHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCC VEVVEPIQALIDNDITVVMVSRCYNGLAEPIYDYVGGGIDLERMGVVFCQGLNGQKARIK HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCEEEE LQVAVSAGMNSKDIAKYMHDAVS EEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916233 [H]