The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116492063

Identifier: 116492063

GI number: 116492063

Start: 308237

End: 309193

Strand: Direct

Name: 116492063

Synonym: PEPE_0259

Alternate gene names: NA

Gene position: 308237-309193 (Clockwise)

Preceding gene: 116492062

Following gene: 116492067

Centisome position: 16.82

GC content: 37.1

Gene sequence:

>957_bases
ATGAGCAAAGTTGAAGTAAATGATACAGTAAAATCGCTTCTTGAAGAAGTTAATGCAAGTTTTCCAGGAGAAGTACGGAT
TGGTTTTGGTGAAGAACAGGCCGGTTTTGTGCGTCACGACCAAGCCCAGCAATTTGTTGAAGAAGGTAAGATGTTAATCA
AGGTCAATGATATTACGGCACCTAATTACACTGCTTCCCATGAGTTAATTCACATGTTAATGATTTTGAAAGGTTTTCCA
CAACTTTATTTCCAATTATCAACAGGGGAAAAAGATACGGATAATCAATTGATGTTTTTGATTACTGAGCTTTACGATGT
AATCGCCCACGAAGTTGTCGTCAAAGAACAACGTCGGCATTATTTAATCGATGATGAGGTGGAAGAAGCTTTCTTTAAAG
GGATTGAAGATGCCGTAGAGGCTGAGGATGCTGGTAAAGTTGACGGATTTAGTACTATTCGTCTAATAATGATGATGGAT
GCCATTACGTTCTATGGAAATGGTTTAGCGAACTTTGAAACGCGGTTGATGGATGCTTTTCCAACAACCTACCAAGCTGC
TAAAAAAATTATGCAAGAACTTGACCAACGGACCATCAGTAATCCGTTTGATTTCCGTCGAAAAGTAGTCAAAGCTTTCG
AATTAATTGATACTCAATTAAAAGAATGGGATTTACCAGAAATTCATGCGATGGAATTTGCGACATTGGGAAGTGTATTT
AGTGAACGTCAACTTCGTTTATCAGTTAAACAATTATTCCAAATCTTCCATTCAGATTTACATGAAAAAGCTCAAGATAC
ACGTGGATTTGTTGGTTTAGGAATTAGCGACCAACAAAACGCCTTTGTGGTACCAACACCTAAAGATATGCCAAGTGACG
AATACTTCCGTGAATTATATGCAAAGAATGTTAAAGACTTCTTTGAAGAAATGAAGATGCCTTATACTATTAGATAA

Upstream 100 bases:

>100_bases
GCAGAGCTAGGAGATGCGGTTAACCGATTAGTCCAAGCTGAAAGAATTGATGCCAAAAATGCCCAACAAATTATTAAACA
GCTAAGAAAGAAGGATAATG

Downstream 100 bases:

>100_bases
AATAAAAATCCTGGACTAAAGTAATTTTAGTTACAGGATTTTTTGTTAGTTATGAAATTGCGATTAATCTTTCTAAACTA
GACAGGTTTTCATGAAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSKVEVNDTVKSLLEEVNASFPGEVRIGFGEEQAGFVRHDQAQQFVEEGKMLIKVNDITAPNYTASHELIHMLMILKGFP
QLYFQLSTGEKDTDNQLMFLITELYDVIAHEVVVKEQRRHYLIDDEVEEAFFKGIEDAVEAEDAGKVDGFSTIRLIMMMD
AITFYGNGLANFETRLMDAFPTTYQAAKKIMQELDQRTISNPFDFRRKVVKAFELIDTQLKEWDLPEIHAMEFATLGSVF
SERQLRLSVKQLFQIFHSDLHEKAQDTRGFVGLGISDQQNAFVVPTPKDMPSDEYFRELYAKNVKDFFEEMKMPYTIR

Sequences:

>Translated_318_residues
MSKVEVNDTVKSLLEEVNASFPGEVRIGFGEEQAGFVRHDQAQQFVEEGKMLIKVNDITAPNYTASHELIHMLMILKGFP
QLYFQLSTGEKDTDNQLMFLITELYDVIAHEVVVKEQRRHYLIDDEVEEAFFKGIEDAVEAEDAGKVDGFSTIRLIMMMD
AITFYGNGLANFETRLMDAFPTTYQAAKKIMQELDQRTISNPFDFRRKVVKAFELIDTQLKEWDLPEIHAMEFATLGSVF
SERQLRLSVKQLFQIFHSDLHEKAQDTRGFVGLGISDQQNAFVVPTPKDMPSDEYFRELYAKNVKDFFEEMKMPYTIR
>Mature_317_residues
SKVEVNDTVKSLLEEVNASFPGEVRIGFGEEQAGFVRHDQAQQFVEEGKMLIKVNDITAPNYTASHELIHMLMILKGFPQ
LYFQLSTGEKDTDNQLMFLITELYDVIAHEVVVKEQRRHYLIDDEVEEAFFKGIEDAVEAEDAGKVDGFSTIRLIMMMDA
ITFYGNGLANFETRLMDAFPTTYQAAKKIMQELDQRTISNPFDFRRKVVKAFELIDTQLKEWDLPEIHAMEFATLGSVFS
ERQLRLSVKQLFQIFHSDLHEKAQDTRGFVGLGISDQQNAFVVPTPKDMPSDEYFRELYAKNVKDFFEEMKMPYTIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36733; Mature: 36602

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVEVNDTVKSLLEEVNASFPGEVRIGFGEEQAGFVRHDQAQQFVEEGKMLIKVNDITA
CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
PNYTASHELIHMLMILKGFPQLYFQLSTGEKDTDNQLMFLITELYDVIAHEVVVKEQRRH
CCCCHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
YLIDDEVEEAFFKGIEDAVEAEDAGKVDGFSTIRLIMMMDAITFYGNGLANFETRLMDAF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
PTTYQAAKKIMQELDQRTISNPFDFRRKVVKAFELIDTQLKEWDLPEIHAMEFATLGSVF
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SERQLRLSVKQLFQIFHSDLHEKAQDTRGFVGLGISDQQNAFVVPTPKDMPSDEYFRELY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHH
AKNVKDFFEEMKMPYTIR
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKVEVNDTVKSLLEEVNASFPGEVRIGFGEEQAGFVRHDQAQQFVEEGKMLIKVNDITA
CCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
PNYTASHELIHMLMILKGFPQLYFQLSTGEKDTDNQLMFLITELYDVIAHEVVVKEQRRH
CCCCHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
YLIDDEVEEAFFKGIEDAVEAEDAGKVDGFSTIRLIMMMDAITFYGNGLANFETRLMDAF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
PTTYQAAKKIMQELDQRTISNPFDFRRKVVKAFELIDTQLKEWDLPEIHAMEFATLGSVF
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SERQLRLSVKQLFQIFHSDLHEKAQDTRGFVGLGISDQQNAFVVPTPKDMPSDEYFRELY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHH
AKNVKDFFEEMKMPYTIR
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA