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The map label for this gene is iscU [H]

Identifier: 116515302

GI number: 116515302

Start: 411345

End: 411743

Strand: Direct

Name: iscU [H]

Synonym: BCc_392

Alternate gene names: 116515302

Gene position: 411345-411743 (Clockwise)

Preceding gene: 116515301

Following gene: 116515303

Centisome position: 98.79

GC content: 25.81

Gene sequence:

>399_bases
ATGTCATATAGTAAAAAAGTAATTGATCATTATGAAAATCCAAGAAATGTAGGATCTTTTCCTGAAAAAGAAAATAATAT
TGGAACTAGTTTAGTAGGAGCTCCAGCATGCGGTGATGTTATGAAATTACAAATAAAAGTAGATCATAAAGAAAGAATAA
AAGATGCGTGTTTTAAAACTTATGGATGTGGTTCTGCTATTGCATCTAGTTCATTAATGACAGAATGGGTAAAAGGAAAA
ACATTAAATCAAGCAAAAAAAATAAAAAATACTGATATTGCTAAAGAATTAGAATTACCACCTGTAAAAATTCATTGTTC
TATCTTAGCAGAAGATGCCATTAAAGCAGCAATAAAAAATTATTATCAAAAAAATAAAAAAACAAAAAAAAAAAAATAA

Upstream 100 bases:

>100_bases
TTAAAATTAAGAAAATTATCTCCACTTTGGGAAATGTTTAAAGCAGGTATTAATATTGATTCTATTAATTGGAATTAATT
ATTTATATAGGAAAAAAAAT

Downstream 100 bases:

>100_bases
AAAAAAAATTAGTGCCAGAAAATATATCTAATATTTCCTTAGCACTAATATAATTAATATATTTAAATAAAATACAATTA
AAAATATTAATATATAATAA

Product: scaffold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSYSKKVIDHYENPRNVGSFPEKENNIGTSLVGAPACGDVMKLQIKVDHKERIKDACFKTYGCGSAIASSSLMTEWVKGK
TLNQAKKIKNTDIAKELELPPVKIHCSILAEDAIKAAIKNYYQKNKKTKKKK

Sequences:

>Translated_132_residues
MSYSKKVIDHYENPRNVGSFPEKENNIGTSLVGAPACGDVMKLQIKVDHKERIKDACFKTYGCGSAIASSSLMTEWVKGK
TLNQAKKIKNTDIAKELELPPVKIHCSILAEDAIKAAIKNYYQKNKKTKKKK
>Mature_131_residues
SYSKKVIDHYENPRNVGSFPEKENNIGTSLVGAPACGDVMKLQIKVDHKERIKDACFKTYGCGSAIASSSLMTEWVKGKT
LNQAKKIKNTDIAKELELPPVKIHCSILAEDAIKAAIKNYYQKNKKTKKKK

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=127, Percent_Identity=72.4409448818898, Blast_Score=192, Evalue=8e-50,
Organism=Homo sapiens, GI24307953, Length=129, Percent_Identity=69.7674418604651, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI1788878, Length=126, Percent_Identity=75.3968253968254, Blast_Score=202, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI17543474, Length=125, Percent_Identity=67.2, Blast_Score=180, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6325122, Length=123, Percent_Identity=70.7317073170732, Blast_Score=176, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6324800, Length=123, Percent_Identity=68.2926829268293, Blast_Score=171, Evalue=4e-44,
Organism=Drosophila melanogaster, GI21355597, Length=125, Percent_Identity=70.4, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011339
- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 14729; Mature: 14598

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSKKVIDHYENPRNVGSFPEKENNIGTSLVGAPACGDVMKLQIKVDHKERIKDACFKT
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECHHHHHHHHHHHH
YGCGSAIASSSLMTEWVKGKTLNQAKKIKNTDIAKELELPPVKIHCSILAEDAIKAAIKN
CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHH
YYQKNKKTKKKK
HHHHHHHCCCCC
>Mature Secondary Structure 
SYSKKVIDHYENPRNVGSFPEKENNIGTSLVGAPACGDVMKLQIKVDHKERIKDACFKT
CCCHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECHHHHHHHHHHHH
YGCGSAIASSSLMTEWVKGKTLNQAKKIKNTDIAKELELPPVKIHCSILAEDAIKAAIKN
CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHH
YYQKNKKTKKKK
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]