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The map label for this gene is hscB [H]

Identifier: 116515303

GI number: 116515303

Start: 411908

End: 412420

Strand: Direct

Name: hscB [H]

Synonym: BCc_393

Alternate gene names: 116515303

Gene position: 411908-412420 (Clockwise)

Preceding gene: 116515302

Following gene: 116515304

Centisome position: 98.93

GC content: 9.94

Gene sequence:

>513_bases
ATGAATTACTTCAAATTATTTCAATTAAATCAAGAATTAAAAATAGATAAAAAAAAATTAAAAAAAAATTTTTATATATT
ACAAAAAAAATATCATCCTGATTTAAACTTAAAAAAAAAAATAAAAAAAAAAGATCAATTATTAATATCAATAAAAATTA
ATCAAGGTTATAATATATTAAAAAATAAATTTTCTAGGGCTAATCATTTATTAGATATAAATAAAAAAAAAAATTTTTAT
AAAAAAAATAATATTACAAAAAATAAAGATATTCTTATAGAAAAATTTAATTTATATGAAGAAATACAAAAAATAAAAAA
AAAACCGAATCAATTAATTAAAATAAAAAATTTTATAAAAAAAATTAAAAAAAAAAAAAATTTATTATTTTTAAAATTTA
ATAAAAAAATCAAAGAAAAAAAAATTGAAAAAGCAAACAAAATTCTTTTTCATATATCTTTTATTTATAAAATTCTAAAT
AAAGCAAAAAATTTTAAAAAAAAACTAAAATAG

Upstream 100 bases:

>100_bases
AAATAAAATACAATTAAAAATATTAATATATAATAAATTTATATTATTAAATTTAAATTTTTTCTAATTTTTCATAATTT
TTTTTATAAATAGGTTTATA

Downstream 100 bases:

>100_bases
GTAAACAATGAAAAAAAAAACAATAATTGGAATTGACTTCGGAACAACAAACAGTTTAGTTTCTACAATATTAGAAAAAA
AAATAAAAATAATTAATAAT

Product: HscB

Products: NA

Alternate protein names: Hsc20 [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNYFKLFQLNQELKIDKKKLKKNFYILQKKYHPDLNLKKKIKKKDQLLISIKINQGYNILKNKFSRANHLLDINKKKNFY
KKNNITKNKDILIEKFNLYEEIQKIKKKPNQLIKIKNFIKKIKKKKNLLFLKFNKKIKEKKIEKANKILFHISFIYKILN
KAKNFKKKLK

Sequences:

>Translated_170_residues
MNYFKLFQLNQELKIDKKKLKKNFYILQKKYHPDLNLKKKIKKKDQLLISIKINQGYNILKNKFSRANHLLDINKKKNFY
KKNNITKNKDILIEKFNLYEEIQKIKKKPNQLIKIKNFIKKIKKKKNLLFLKFNKKIKEKKIEKANKILFHISFIYKILN
KAKNFKKKLK
>Mature_170_residues
MNYFKLFQLNQELKIDKKKLKKNFYILQKKYHPDLNLKKKIKKKDQLLISIKINQGYNILKNKFSRANHLLDINKKKNFY
KKNNITKNKDILIEKFNLYEEIQKIKKKPNQLIKIKNFIKKIKKKKNLLFLKFNKKIKEKKIEKANKILFHISFIYKILN
KAKNFKKKLK

Specific function: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward hscA [H]

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Escherichia coli, GI1788876, Length=170, Percent_Identity=24.1176470588235, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR009073
- InterPro:   IPR004640 [H]

Pfam domain/function: PF00226 DnaJ; PF07743 HSCB_C [H]

EC number: NA

Molecular weight: Translated: 20868; Mature: 20868

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYFKLFQLNQELKIDKKKLKKNFYILQKKYHPDLNLKKKIKKKDQLLISIKINQGYNIL
CCCCEEEECCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCEEEEEEEECCCHHHH
KNKFSRANHLLDINKKKNFYKKNNITKNKDILIEKFNLYEEIQKIKKKPNQLIKIKNFIK
HHHHHHHHHEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KIKKKKNLLFLKFNKKIKEKKIEKANKILFHISFIYKILNKAKNFKKKLK
HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNYFKLFQLNQELKIDKKKLKKNFYILQKKYHPDLNLKKKIKKKDQLLISIKINQGYNIL
CCCCEEEECCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCEEEEEEEECCCHHHH
KNKFSRANHLLDINKKKNFYKKNNITKNKDILIEKFNLYEEIQKIKKKPNQLIKIKNFIK
HHHHHHHHHEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KIKKKKNLLFLKFNKKIKEKKIEKANKILFHISFIYKILNKAKNFKKKLK
HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA