The gene/protein map for NC_008513 is currently unavailable.
Definition Buchnera aphidicola str. Cc (Cinara cedri), complete genome.
Accession NC_008513
Length 416,380

Click here to switch to the map view.

The map label for this gene is flgF [C]

Identifier: 116515144

GI number: 116515144

Start: 244844

End: 245548

Strand: Direct

Name: flgF [C]

Synonym: BCc_211

Alternate gene names: 116515144

Gene position: 244844-245548 (Clockwise)

Preceding gene: 116515142

Following gene: 116515145

Centisome position: 58.8

GC content: 20.43

Gene sequence:

>705_bases
ATGAATAATATAATAAATTCTATAATTACATTAGATGATAGAAATTTAATTAGTAAAGAAACTATAATAAATCAAGATTA
TGATAATATAGATACAGAATTTTATAAAAAATATGCTTACAACATTCAAACAAATTCTAGTGATGATCAAATAACAAACA
AAAAAATAGTAGATATAAATTCAGATGATAATTCATCATTACAATCTTATTCAAATTCTTCAATTGATGAAGACACAGAA
ACTGGTTGGTTTTCTGTTTTTGATGATGATGGATATGAAGGGTTTTTACGTGAAGGTCATATTGCTATTAATGAAAATCG
CGAATTATGTATGAATAATTATACGTTATTAAATACTGATGAAAAACCTATTATAGTTCCTGAAAATAAAAAAATTTTAA
TTAAAATGGACGGTACAATTGTTACTAAAGAAGATAATAATGAAATAAATTATAAACCAATATTTTTAGGACAATTAAAA
TTCATCACTTTAAATAATAATGATGTTATATCTCGTAATGAAAGTGAAATTTTTGATTTAAGTTATTCTGGTTTAGAAAA
ATATAAAAACAACAATTTAGAAACAAAATCTAATTATGTGTTAAAAAATACTATCAGAAAAAATGATATTAAAAAAACAA
ATAATTTGATAAATACATTAAATGTTATAAGATCACTTGAATCTGATATGAAAATTAATTCATAA

Upstream 100 bases:

>100_bases
AAATTAAATTATATAAAAATTTACATAAATTTTTTTTTATAAAAATTATTTATTAAATAATATAAATTTATATTTATAAT
ATTAAAAGTAGGAATAATAT

Downstream 100 bases:

>100_bases
AATAGTATACAAATAAAATTTTTATAATTTATTTTAAATAAAAAATATTTTTTATTTGACAGAACACATTGTATAGAAAC
TAGATGAAAATCTGTTTCTA

Product: FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNNIINSIITLDDRNLISKETIINQDYDNIDTEFYKKYAYNIQTNSSDDQITNKKIVDINSDDNSSLQSYSNSSIDEDTE
TGWFSVFDDDGYEGFLREGHIAINENRELCMNNYTLLNTDEKPIIVPENKKILIKMDGTIVTKEDNNEINYKPIFLGQLK
FITLNNNDVISRNESEIFDLSYSGLEKYKNNNLETKSNYVLKNTIRKNDIKKTNNLINTLNVIRSLESDMKINS

Sequences:

>Translated_234_residues
MNNIINSIITLDDRNLISKETIINQDYDNIDTEFYKKYAYNIQTNSSDDQITNKKIVDINSDDNSSLQSYSNSSIDEDTE
TGWFSVFDDDGYEGFLREGHIAINENRELCMNNYTLLNTDEKPIIVPENKKILIKMDGTIVTKEDNNEINYKPIFLGQLK
FITLNNNDVISRNESEIFDLSYSGLEKYKNNNLETKSNYVLKNTIRKNDIKKTNNLINTLNVIRSLESDMKINS
>Mature_234_residues
MNNIINSIITLDDRNLISKETIINQDYDNIDTEFYKKYAYNIQTNSSDDQITNKKIVDINSDDNSSLQSYSNSSIDEDTE
TGWFSVFDDDGYEGFLREGHIAINENRELCMNNYTLLNTDEKPIIVPENKKILIKMDGTIVTKEDNNEINYKPIFLGQLK
FITLNNNDVISRNESEIFDLSYSGLEKYKNNNLETKSNYVLKNTIRKNDIKKTNNLINTLNVIRSLESDMKINS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27088; Mature: 27088

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIINSIITLDDRNLISKETIINQDYDNIDTEFYKKYAYNIQTNSSDDQITNKKIVDIN
CCCHHHHEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCEEEEEC
SDDNSSLQSYSNSSIDEDTETGWFSVFDDDGYEGFLREGHIAINENRELCMNNYTLLNTD
CCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCEEEECCCCEEECCCEEEECC
EKPIIVPENKKILIKMDGTIVTKEDNNEINYKPIFLGQLKFITLNNNDVISRNESEIFDL
CCCEEEECCCEEEEEECCEEEEECCCCCCEEEEEEEEEEEEEEECCCCEECCCCCEEEEE
SYSGLEKYKNNNLETKSNYVLKNTIRKNDIKKTNNLINTLNVIRSLESDMKINS
CHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNIINSIITLDDRNLISKETIINQDYDNIDTEFYKKYAYNIQTNSSDDQITNKKIVDIN
CCCHHHHEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCEEEEEC
SDDNSSLQSYSNSSIDEDTETGWFSVFDDDGYEGFLREGHIAINENRELCMNNYTLLNTD
CCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCEEEECCCCEEECCCEEEECC
EKPIIVPENKKILIKMDGTIVTKEDNNEINYKPIFLGQLKFITLNNNDVISRNESEIFDL
CCCEEEECCCEEEEEECCEEEEECCCCCCEEEEEEEEEEEEEEECCCCEECCCCCEEEEE
SYSGLEKYKNNNLETKSNYVLKNTIRKNDIKKTNNLINTLNVIRSLESDMKINS
CHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA