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The map label for this gene is rsmC

Identifier: 116515142

GI number: 116515142

Start: 241436

End: 242467

Strand: Direct

Name: rsmC

Synonym: BCc_206

Alternate gene names: 116515142

Gene position: 241436-242467 (Clockwise)

Preceding gene: 116515138

Following gene: 116515144

Centisome position: 57.98

GC content: 15.99

Gene sequence:

>1032_bases
ATGAATAAAACAGTAATTAAAACATTTCAAATATCAAAAGAATACAAAATATTAAAAAAAAATTTTCAATTATTTAAAAA
CAAAACTACAATTATATCAGGAATAATACCTAGTGTTTTTTTAAAAATTAATATAATAAAAAGATTTATTTTTTATGTTA
ATTATTTTAATCTTTATCTTAAAATACTTAAAAAAAACAGTAAAAATGTTATTTTTAATAATTTTAACCATAAAAATAAA
TTATCTTCATATAAACAATTAATTTTTTTTTTAACAAAAAATAAAAAAGAATTTAAGTTACACTTAACATTTTTATTATC
TCATATATCTAAAACTTGCGTGATATATGTTGTTGGTGAAAAAAAATGTGGAATTAATAGTATTAGTAAAATTTTTTCTA
ATTATTTAATATTTAAAAAAATAGATTATGCTAGAACATGTTCTTTATATAAAGCAAAAATAATGAAATTACCAAAATTT
TATTTACATAAATTTATAAACATCTATATTTGGAATAATATAACTATTCAAAGTTTACCAGGAGTTTTTGGATATAAAAA
AATTGATACTGGTAGTAAATTACTAATATCAACCTTTAATAAAAAAATCAATGGTAAAATATTAGATATTGGTTCAGGTA
CAGGAATTTTAAGTATAGCTCTAGCAAAAAAAAATCCATTAATAAAAATTACATTAACTGATATTTATGACGCGGCTATT
TGGTGTAGTAAAAATAATCTCATAAAAAATAATTTAATTGGAAAAGTTTTATTTAGTGATATTTATTCACATATTAAAAA
AAGATATGATCTGATTATATCTAATCCACCTATTCATTATAATTTAAAAATTAATTTAAAAATATTAAAAAAAATAATAA
AAAATTCTAAAAAACATTTAAAAAAGAAAGGAGAATTACGAATAGTAATTAGTTCTTTTATTTCGTTAAAATATATTATT
AATTTTAATAAAATTAATTTTAAAATTTTACTTAAAAATAAATCTTATACAGTAATACAAATTACTAATTAA

Upstream 100 bases:

>100_bases
ATTAAATGATATTTTTAAAAATATTTTTGTTATAATATTTAAAAATTTATATAAAAAATTTACTTTTTTTATATTTTAAA
CAATTTTTGAAAATAAAATT

Downstream 100 bases:

>100_bases
AATTTAATAAAAATATACCCAGAGCGGGAATTGAACCCGCAAAGCTATTAAAAGCCGAGGGATTTTAAGTCCCTTGTGTT
TACCAATTTCACCATCTGGG

Product: 16S RNA m2G1207 methylase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNKTVIKTFQISKEYKILKKNFQLFKNKTTIISGIIPSVFLKINIIKRFIFYVNYFNLYLKILKKNSKNVIFNNFNHKNK
LSSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGEKKCGINSISKIFSNYLIFKKIDYARTCSLYKAKIMKLPKF
YLHKFINIYIWNNITIQSLPGVFGYKKIDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAI
WCSKNNLIKNNLIGKVLFSDIYSHIKKRYDLIISNPPIHYNLKINLKILKKIIKNSKKHLKKKGELRIVISSFISLKYII
NFNKINFKILLKNKSYTVIQITN

Sequences:

>Translated_343_residues
MNKTVIKTFQISKEYKILKKNFQLFKNKTTIISGIIPSVFLKINIIKRFIFYVNYFNLYLKILKKNSKNVIFNNFNHKNK
LSSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGEKKCGINSISKIFSNYLIFKKIDYARTCSLYKAKIMKLPKF
YLHKFINIYIWNNITIQSLPGVFGYKKIDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAI
WCSKNNLIKNNLIGKVLFSDIYSHIKKRYDLIISNPPIHYNLKINLKILKKIIKNSKKHLKKKGELRIVISSFISLKYII
NFNKINFKILLKNKSYTVIQITN
>Mature_343_residues
MNKTVIKTFQISKEYKILKKNFQLFKNKTTIISGIIPSVFLKINIIKRFIFYVNYFNLYLKILKKNSKNVIFNNFNHKNK
LSSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGEKKCGINSISKIFSNYLIFKKIDYARTCSLYKAKIMKLPKF
YLHKFINIYIWNNITIQSLPGVFGYKKIDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAI
WCSKNNLIKNNLIGKVLFSDIYSHIKKRYDLIISNPPIHYNLKINLKILKKIIKNSKKHLKKKGELRIVISSFISLKYII
NFNKINFKILLKNKSYTVIQITN

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family

Homologues:

Organism=Escherichia coli, GI1790830, Length=270, Percent_Identity=34.0740740740741, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI87082206, Length=168, Percent_Identity=23.2142857142857, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMC_BUCCC (Q057M1)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802771.1
- ProteinModelPortal:   Q057M1
- SMR:   Q057M1
- STRING:   Q057M1
- EnsemblBacteria:   EBBUCT00000001310
- GeneID:   4440726
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_206
- eggNOG:   COG2813
- GeneTree:   EBGT00050000007939
- HOGENOM:   HBG296757
- OMA:   TKNKQEC
- BioCyc:   BAPH372461:BCC_206-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01862
- InterPro:   IPR013675
- InterPro:   IPR007848

Pfam domain/function: PF05175 MTS; PF08468 MTS_N

EC number: =2.1.1.172

Molecular weight: Translated: 40050; Mature: 40050

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTVIKTFQISKEYKILKKNFQLFKNKTTIISGIIPSVFLKINIIKRFIFYVNYFNLYL
CCCEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILKKNSKNVIFNNFNHKNKLSSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGE
HHHHCCCCCEEEECCCCHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHCCCEEEEEEEEC
KKCGINSISKIFSNYLIFKKIDYARTCSLYKAKIMKLPKFYLHKFINIYIWNNITIQSLP
CCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCEEEECCC
GVFGYKKIDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAI
CCCCEEEECCCCEEEHEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEHHHCCEEE
WCSKNNLIKNNLIGKVLFSDIYSHIKKRYDLIISNPPIHYNLKINLKILKKIIKNSKKHL
EECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHH
KKKGELRIVISSFISLKYIINFNKINFKILLKNKSYTVIQITN
HCCCCEEEEEHHHHEEEEEEEEEEEEEEEEEECCCEEEEEEEC
>Mature Secondary Structure
MNKTVIKTFQISKEYKILKKNFQLFKNKTTIISGIIPSVFLKINIIKRFIFYVNYFNLYL
CCCEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILKKNSKNVIFNNFNHKNKLSSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGE
HHHHCCCCCEEEECCCCHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHCCCEEEEEEEEC
KKCGINSISKIFSNYLIFKKIDYARTCSLYKAKIMKLPKFYLHKFINIYIWNNITIQSLP
CCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCEEEECCC
GVFGYKKIDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAI
CCCCEEEECCCCEEEHEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEHHHCCEEE
WCSKNNLIKNNLIGKVLFSDIYSHIKKRYDLIISNPPIHYNLKINLKILKKIIKNSKKHL
EECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHH
KKKGELRIVISSFISLKYIINFNKINFKILLKNKSYTVIQITN
HCCCCEEEEEHHHHEEEEEEEEEEEEEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA