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The map label for this gene is yebC [C]

Identifier: 116515133

GI number: 116515133

Start: 231498

End: 232226

Strand: Direct

Name: yebC [C]

Synonym: BCc_197

Alternate gene names: 116515133

Gene position: 231498-232226 (Clockwise)

Preceding gene: 116515132

Following gene: 116515135

Centisome position: 55.6

GC content: 15.09

Gene sequence:

>729_bases
ATGGCCGGACATAGCAAATGGGCTAATACTAAACATAGAAAATCAGCTCAAGATATAAAAAAAAGTAAAATATTTACTAA
AATAACAAGAAAAATAACAATTTCTTGTTTAAAGAACGGGACAGATGTAAATAAAAATTTTCAATTAAGAAGAATTTTAG
AAAAAGCTAATTTATATAATTTAAAAAAAGATTTAATTCAAAAAGCTATTAATAGAGGAAAAGATAAAAACAAAAACATA
CAAAAAAAATCTTTTAATATGAAATATGCAGGATATGGTCCTTCTGGAATTGTAATTATTATATTTTGTAATACAGATAA
TAGTAATAGAACTATTTCTAATATAAGAAATATTTTTTCTAAATTTAAAGGAAAATTAGTAAAATACAATGATATTAAAT
ATTTATTTAATTTTTTTTATTATATTAATATAAATAATATTGTTAATAATAAAGAAATTGTTTTAAGTATAATTAAAAAA
AATAATATTAAAAATTTTAAACAAATAGATAAAAATAATATGGAAATAATAATTAAATTAAATAAATTTAAAAAAATAAA
AAAAATATTTCTCTCTTCATCAATTGTATTTACTAATGTTAATTTAGTTATTAAACCTAAAAATATATATATTATTAACA
ATATTTATAAAAGTAAAATCAAAAATATGATAAATTTATTAAAAAAACTAAAAGAAACTACAAAAATAATTCATAATACA
AAAATATAA

Upstream 100 bases:

>100_bases
TTAATTAAAAATCAAAATTATAAAAATTAAATTAATAATTCTAAATATGTTTAATATAATCATTACTTTTAAAAATATTA
AAATATCTAAATGAGGAATT

Downstream 100 bases:

>100_bases
AATTAATTATTCTTAAAAAAAAATATTTTTATAAAATTTTATTTACTTAAATTAATTTTATTATTCTGAATTGATTATAT
ATGTTAAAATATGTATAAAT

Product: YebC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAGHSKWANTKHRKSAQDIKKSKIFTKITRKITISCLKNGTDVNKNFQLRRILEKANLYNLKKDLIQKAINRGKDKNKNI
QKKSFNMKYAGYGPSGIVIIIFCNTDNSNRTISNIRNIFSKFKGKLVKYNDIKYLFNFFYYININNIVNNKEIVLSIIKK
NNIKNFKQIDKNNMEIIIKLNKFKKIKKIFLSSSIVFTNVNLVIKPKNIYIINNIYKSKIKNMINLLKKLKETTKIIHNT
KI

Sequences:

>Translated_242_residues
MAGHSKWANTKHRKSAQDIKKSKIFTKITRKITISCLKNGTDVNKNFQLRRILEKANLYNLKKDLIQKAINRGKDKNKNI
QKKSFNMKYAGYGPSGIVIIIFCNTDNSNRTISNIRNIFSKFKGKLVKYNDIKYLFNFFYYININNIVNNKEIVLSIIKK
NNIKNFKQIDKNNMEIIIKLNKFKKIKKIFLSSSIVFTNVNLVIKPKNIYIINNIYKSKIKNMINLLKKLKETTKIIHNT
KI
>Mature_241_residues
AGHSKWANTKHRKSAQDIKKSKIFTKITRKITISCLKNGTDVNKNFQLRRILEKANLYNLKKDLIQKAINRGKDKNKNIQ
KKSFNMKYAGYGPSGIVIIIFCNTDNSNRTISNIRNIFSKFKGKLVKYNDIKYLFNFFYYININNIVNNKEIVLSIIKKN
NIKNFKQIDKNNMEIIIKLNKFKKIKKIFLSSSIVFTNVNLVIKPKNIYIINNIYKSKIKNMINLLKKLKETTKIIHNTK
I

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Escherichia coli, GI1788171, Length=244, Percent_Identity=29.5081967213115, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788294, Length=133, Percent_Identity=35.3383458646617, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=136, Percent_Identity=37.5, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y597_BUCCC (Q057N0)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802762.1
- ProteinModelPortal:   Q057N0
- SMR:   Q057N0
- STRING:   Q057N0
- EnsemblBacteria:   EBBUCT00000001241
- GeneID:   4440717
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_197
- eggNOG:   COG0217
- BioCyc:   BAPH372461:BCC_197-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 28398; Mature: 28267

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANTKHRKSAQDIKKSKIFTKITRKITISCLKNGTDVNKNFQLRRILEKANLYN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LKKDLIQKAINRGKDKNKNIQKKSFNMKYAGYGPSGIVIIIFCNTDNSNRTISNIRNIFS
HHHHHHHHHHHCCCCCCCCCHHHHCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
KFKGKLVKYNDIKYLFNFFYYININNIVNNKEIVLSIIKKNNIKNFKQIDKNNMEIIIKL
HHCCCEEEECHHHHHEEEEEEEEECCCCCCHHHHHEEHHHCCCHHHHHHCCCCEEEEEEE
NKFKKIKKIFLSSSIVFTNVNLVIKPKNIYIINNIYKSKIKNMINLLKKLKETTKIIHNT
HHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KI
CC
>Mature Secondary Structure 
AGHSKWANTKHRKSAQDIKKSKIFTKITRKITISCLKNGTDVNKNFQLRRILEKANLYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LKKDLIQKAINRGKDKNKNIQKKSFNMKYAGYGPSGIVIIIFCNTDNSNRTISNIRNIFS
HHHHHHHHHHHCCCCCCCCCHHHHCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
KFKGKLVKYNDIKYLFNFFYYININNIVNNKEIVLSIIKKNNIKNFKQIDKNNMEIIIKL
HHCCCEEEECHHHHHEEEEEEEEECCCCCCHHHHHEEHHHCCCHHHHHHCCCCEEEEEEE
NKFKKIKKIFLSSSIVFTNVNLVIKPKNIYIINNIYKSKIKNMINLLKKLKETTKIIHNT
HHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA