Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is zwf [H]
Identifier: 116515135
GI number: 116515135
Start: 234325
End: 235785
Strand: Direct
Name: zwf [H]
Synonym: BCc_199
Alternate gene names: 116515135
Gene position: 234325-235785 (Clockwise)
Preceding gene: 116515133
Following gene: 116515136
Centisome position: 56.28
GC content: 17.11
Gene sequence:
>1461_bases ATGAAATTACAAATGCATACACATGATTTAATTATTTTTGGAACTAAAGGTGATTTAGCTCAAAGAAAATTGTTTCCAGC ATTATATTCGTTAGAAAAAAAAAATAAACTTGTAGATAATACACGAATTATTGGTGTTAGTAGATCAAATACTAATACAA AAGAATATATTCAAATTATTTATAATGCATTAAAAAAATTTTTAAAAGAAAAAATAAATAAAAAAATATGGGAAAAATTC AAAAAACGTTTTATTTTTTGTAAAATGAATATTAATTGTCTTCAAGATTTTAAAAAACTAAAAATAATACTAAAAAAAAA AAAACATATATTACTTAATTATTTTGCAGTATCCTCAAATTTATTTATTAAAATTTGTAAAGGATTGTCTAATATTAATT GTAATAGTAAAACATCAAAAATAATTATAGAAAAACCTATTGGTGATTCTTTAAAATCATTTAATTTTATTAATAAATCT ATCAAAAAATATTTTTCAGAAAAACAAATATTTAGAATTGATCATTATTTAGGAAAAGAAGCATTATTAAATCTTATTAC ATTAAAATTTTTTAATCCATTTTTTAATAATAATTTTAATAAAAAAACAATTGATCATATTCAAATAACATTATCTGAAA GTCTAGGTATTGAAAAAAGATGGAGTTATTTTGATCAAACTGGACAAATTATAGATATGGTTCAAAATCATATGCTACAA ATTATTTCTATTTTTGCTATGAATAAACCAAAATCATTAAAGAAAAAACATATTTGCTCTGAAAAAATAAAAATTTTAAA ATCATTATATATTAAAAATAATGATATTAAAAATAATATATCATTAGGACAATATAAAAGTGGAAAAATTAATAATAATA TTGTTCCATCATATGTGAATGAAGAAAATTCAAAAAAAAATAGTTTAACAGAAACTTTTGCAGCTATAAAATTATATATT AATACAAAAAAATGGAAAAATGTTCCATTTTATATTCGTACTGGAAAAAGATTATTAAAAAAATGTTCTAAAATTATTAT TTTTTTAAAAAAATCATCAGAAAACTTACTAAAAAATAATAAAAAAATATTTAATAATAGAATTATTATAAATTTACAAT CACCTTTTAATATTAAAATAAAATTTTTTAATAAAATTCCTCAACTAAATTCAAAATTTAAATTAACTTCTAGTGAAATG TTATTTAATTATAAAAAAATTACAAAAAATAATTTTTTTCCAGAAGAATATGAAAAATTATTATTAGAAAGTATGAAAGG AAATCAATTTTTATTTGTTAATTACAAAGAAATTAAATATTCTTGGAAATGGATTGATTCTATAATAAAAATATATAAAA AAAATCCATTATTACTCGAATATTATTCATCTGGTAGTTGGGGACCTAAATCATCAGAAAAATTAATAAAAAAAGATAAG AGAAAATGGGATAATAATTAA
Upstream 100 bases:
>100_bases TTACATATATATTTTAAAAATTTAATAAAATTAATATTTATAAAATAAAAAAAAATTTTTAAAATTCTTTAATTTTAATA TTTTAATAATAGGGTTTAGT
Downstream 100 bases:
>100_bases ATAATTATAAATATATTTTATATATATAGTTATTTAAAATTTTAAATATATTAATTTTTTTTATATAATACTTTTTATAT ATAACAATAAAATTTTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MKLQMHTHDLIIFGTKGDLAQRKLFPALYSLEKKNKLVDNTRIIGVSRSNTNTKEYIQIIYNALKKFLKEKINKKIWEKF KKRFIFCKMNINCLQDFKKLKIILKKKKHILLNYFAVSSNLFIKICKGLSNINCNSKTSKIIIEKPIGDSLKSFNFINKS IKKYFSEKQIFRIDHYLGKEALLNLITLKFFNPFFNNNFNKKTIDHIQITLSESLGIEKRWSYFDQTGQIIDMVQNHMLQ IISIFAMNKPKSLKKKHICSEKIKILKSLYIKNNDIKNNISLGQYKSGKINNNIVPSYVNEENSKKNSLTETFAAIKLYI NTKKWKNVPFYIRTGKRLLKKCSKIIIFLKKSSENLLKNNKKIFNNRIIINLQSPFNIKIKFFNKIPQLNSKFKLTSSEM LFNYKKITKNNFFPEEYEKLLLESMKGNQFLFVNYKEIKYSWKWIDSIIKIYKKNPLLLEYYSSGSWGPKSSEKLIKKDK RKWDNN
Sequences:
>Translated_486_residues MKLQMHTHDLIIFGTKGDLAQRKLFPALYSLEKKNKLVDNTRIIGVSRSNTNTKEYIQIIYNALKKFLKEKINKKIWEKF KKRFIFCKMNINCLQDFKKLKIILKKKKHILLNYFAVSSNLFIKICKGLSNINCNSKTSKIIIEKPIGDSLKSFNFINKS IKKYFSEKQIFRIDHYLGKEALLNLITLKFFNPFFNNNFNKKTIDHIQITLSESLGIEKRWSYFDQTGQIIDMVQNHMLQ IISIFAMNKPKSLKKKHICSEKIKILKSLYIKNNDIKNNISLGQYKSGKINNNIVPSYVNEENSKKNSLTETFAAIKLYI NTKKWKNVPFYIRTGKRLLKKCSKIIIFLKKSSENLLKNNKKIFNNRIIINLQSPFNIKIKFFNKIPQLNSKFKLTSSEM LFNYKKITKNNFFPEEYEKLLLESMKGNQFLFVNYKEIKYSWKWIDSIIKIYKKNPLLLEYYSSGSWGPKSSEKLIKKDK RKWDNN >Mature_486_residues MKLQMHTHDLIIFGTKGDLAQRKLFPALYSLEKKNKLVDNTRIIGVSRSNTNTKEYIQIIYNALKKFLKEKINKKIWEKF KKRFIFCKMNINCLQDFKKLKIILKKKKHILLNYFAVSSNLFIKICKGLSNINCNSKTSKIIIEKPIGDSLKSFNFINKS IKKYFSEKQIFRIDHYLGKEALLNLITLKFFNPFFNNNFNKKTIDHIQITLSESLGIEKRWSYFDQTGQIIDMVQNHMLQ IISIFAMNKPKSLKKKHICSEKIKILKSLYIKNNDIKNNISLGQYKSGKINNNIVPSYVNEENSKKNSLTETFAAIKLYI NTKKWKNVPFYIRTGKRLLKKCSKIIIFLKKSSENLLKNNKKIFNNRIIINLQSPFNIKIKFFNKIPQLNSKFKLTSSEM LFNYKKITKNNFFPEEYEKLLLESMKGNQFLFVNYKEIKYSWKWIDSIIKIYKKNPLLLEYYSSGSWGPKSSEKLIKKDK RKWDNN
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=487, Percent_Identity=30.3901437371663, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI109389365, Length=487, Percent_Identity=30.3901437371663, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI52145310, Length=378, Percent_Identity=24.6031746031746, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1788158, Length=477, Percent_Identity=42.1383647798742, Blast_Score=450, Evalue=1e-128, Organism=Caenorhabditis elegans, GI17538218, Length=482, Percent_Identity=30.2904564315353, Blast_Score=225, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6324088, Length=480, Percent_Identity=32.0833333333333, Blast_Score=252, Evalue=9e-68, Organism=Drosophila melanogaster, GI24643350, Length=479, Percent_Identity=30.2713987473904, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24643352, Length=479, Percent_Identity=30.2713987473904, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI221513548, Length=486, Percent_Identity=25.3086419753086, Blast_Score=160, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 57616; Mature: 57616
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQMHTHDLIIFGTKGDLAQRKLFPALYSLEKKNKLVDNTRIIGVSRSNTNTKEYIQII CEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH YNALKKFLKEKINKKIWEKFKKRFIFCKMNINCLQDFKKLKIILKKKKHILLNYFAVSSN HHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHCHHEEEEEEEECCC LFIKICKGLSNINCNSKTSKIIIEKPIGDSLKSFNFINKSIKKYFSEKQIFRIDHYLGKE HHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHCHH ALLNLITLKFFNPFFNNNFNKKTIDHIQITLSESLGIEKRWSYFDQTGQIIDMVQNHMLQ HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH IISIFAMNKPKSLKKKHICSEKIKILKSLYIKNNDIKNNISLGQYKSGKINNNIVPSYVN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EENSKKNSLTETFAAIKLYINTKKWKNVPFYIRTGKRLLKKCSKIIIFLKKSSENLLKNN CCCCCHHHHHHHHHHEEEEEECCCCCCCCEEEECHHHHHHHHHHEEEEEECCCCHHHHCC KKIFNNRIIINLQSPFNIKIKFFNKIPQLNSKFKLTSSEMLFNYKKITKNNFFPEEYEKL HHEECCEEEEEECCCCEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHH LLESMKGNQFLFVNYKEIKYSWKWIDSIIKIYKKNPLLLEYYSSGSWGPKSSEKLIKKDK HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH RKWDNN HHCCCC >Mature Secondary Structure MKLQMHTHDLIIFGTKGDLAQRKLFPALYSLEKKNKLVDNTRIIGVSRSNTNTKEYIQII CEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH YNALKKFLKEKINKKIWEKFKKRFIFCKMNINCLQDFKKLKIILKKKKHILLNYFAVSSN HHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHCHHEEEEEEEECCC LFIKICKGLSNINCNSKTSKIIIEKPIGDSLKSFNFINKSIKKYFSEKQIFRIDHYLGKE HHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHCHH ALLNLITLKFFNPFFNNNFNKKTIDHIQITLSESLGIEKRWSYFDQTGQIIDMVQNHMLQ HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH IISIFAMNKPKSLKKKHICSEKIKILKSLYIKNNDIKNNISLGQYKSGKINNNIVPSYVN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EENSKKNSLTETFAAIKLYINTKKWKNVPFYIRTGKRLLKKCSKIIIFLKKSSENLLKNN CCCCCHHHHHHHHHHEEEEEECCCCCCCCEEEECHHHHHHHHHHEEEEEECCCCHHHHCC KKIFNNRIIINLQSPFNIKIKFFNKIPQLNSKFKLTSSEMLFNYKKITKNNFFPEEYEKL HHEECCEEEEEECCCCEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHH LLESMKGNQFLFVNYKEIKYSWKWIDSIIKIYKKNPLLLEYYSSGSWGPKSSEKLIKKDK HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH RKWDNN HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]