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The map label for this gene is yciL

Identifier: 116515110

GI number: 116515110

Start: 202788

End: 202955

Strand: Direct

Name: yciL

Synonym: BCc_174

Alternate gene names: NA

Gene position: 202788-202955 (Clockwise)

Preceding gene: 116515106

Following gene: 116515112

Centisome position: 48.7

GC content: 18.45

Gene sequence:

>731_bases
ATGGCAGAGAAAATTCAAAAAATATTATCAAATTGTGGTGTAGATTCACGTCGTAATATTGAAAAACATATTTTAAATAA
ATCATTAAAAATAAATGGAAAAATTGTACATATAGGGGAAAGATTTTTAAAAAAAAATATTAAATCGATATTTTTAAAAA
AAAAAAAATTTTTATAAAAAATGAAAAAACAAAAATACTTATATATCATAAGCCAGTTGGAGAAATATGTACTAAAAAAG
ATCAATATAATAGAATTACAGTTTTTAAAAAATTACCAAAATTATTTTTTTCAAAATGGATTAGTATTGGTAGATTAGAT
ATTAATACATCAGGTTTATTATTATTTACTAATTTTGGAGAATTAGCACATAGATTAATGCATCCTAGTTATAGAATAAA
AAGAGAATATCTTGTTTGTGTTCTTGGAAAAATTTTAAAAAAAAAAATACTTTTACTAAAAAAAGGAATTTTGATTAATA
ATTCTATTTCTAAATTTCACGAAATTATTTTTTTAAAAAAAAAAAAAAAAAATCAATGGTTTAAGGTATCTTTGTTTCAA
GGAAAAAATAGAGAAGTTCGTTTATTATGGAATGCTATTAATATCAAAGTTAATCGATTAATTCGAATTAAATTTGGAAT
AATAACATTACCTAAATTTTTGAAATCTGGTTGTTTTTTTGAATTATCTTATCAAAAAACAAAAAATATATTAAGTTTAG
TAAATTTATAA

Upstream 100 bases:

>100_bases
ATTTATGATATATTTTTTATTATTTGAAAAATTTTTTAATATCTATTATGATATAATTTTTATTTATATAAATAATAAAA
ATAAGAAATAGGTATTTAAT

Downstream 100 bases:

>100_bases
ATAAAAAATTTTTAAAATTTCTATAAAAATAATTTTTTTTTTATTTACTAATTTAATAAAATCAATTAATAAAATTACTA
TTATTATTAATTTTTATAAA

Product: YciL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>243_residues
MAEKIQKILSNCGVDSRRNIEKHILNKSLKINGKIVHIGERFLKKNIKSIFLKKKKIFIKNEKTKILIYHKPVGEICTKK
DQYNRITVFKKLPKLFFSKWISIGRLDINTSGLLLFTNFGELAHRLMHPSYRIKREYLVCVLGKILKKKILLLKKGILIN
NSISKFHEIIFLKKKKKNQWFKVSLFQGKNREVRLLWNAINIKVNRLIRIKFGIITLPKFLKSGCFFELSYQKTKNILSL
VNL

Sequences:

>Translated_56_residues
MAEKIQKILSNCGVDSRRNIEKHILNKSLKINGKIVHIGERFLKKNIKSIFLKKKK
>Mature_55_residues
AEKIQKILSNCGVDSRRNIEKHILNKSLKINGKIVHIGERFLKKNIKSIFLKKKK

Specific function: Unknown

COG id: COG1187

COG function: function code J; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6530; Mature: 6399

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKIQKILSNCGVDSRRNIEKHILNKSLKINGKIVHIGERFLKKNIKSIFLKKKK
CHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEKIQKILSNCGVDSRRNIEKHILNKSLKINGKIVHIGERFLKKNIKSIFLKKKK
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA