Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is acpS
Identifier: 116515097
GI number: 116515097
Start: 187971
End: 188351
Strand: Reverse
Name: acpS
Synonym: BCc_161
Alternate gene names: 116515097
Gene position: 188351-187971 (Counterclockwise)
Preceding gene: 116515098
Following gene: 116515092
Centisome position: 45.24
GC content: 16.8
Gene sequence:
>381_bases ATGGCAATTATAGGAATTGGAATTGATGTTATTAATATTTTTAGATTTAAAAAATTAATTATTAATTATGGAATCAAAAT CCCTAAAAAAATTTTATCAAAAAAGGAATTAATTGAATATTCTTATACACATAAAAAAGAAAAATTTTTAGCTATAAGAT TTTCAATTAAAGAAGCTATAGCAAAAGCAATAGGAATAAGTATATTTAAAAATAATTTCTTAAATAACTGTGAAATTTTT TACAATAAAAAAAAAAAAATACAATTAACAACATTAGGATATATAAAAAAAATATTTAAAAAATCACAAGTTAAAAAAAT TTTTTTGAGTGTAACAGATTCAAATAAACATACATATGCAATAGCTATTTTAGAAAAATAA
Upstream 100 bases:
>100_bases ATACTTTATTCAATAAAAAAAATAGAAAAAACATTTAAAAAAAAAACATTATTAAAAATAAAAATTAAAATTAAAAAAAA TAAATTTAAAAAGGAAGAAA
Downstream 100 bases:
>100_bases TACAAAAAAATTTTCTTATGTATATCTTTTTCTTCTAAAAAAATTTTTTAATAAATTTGAGCATTCATATAATAGGATAC CTGATTTTATTTCTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAIIGIGIDVINIFRFKKLIINYGIKIPKKILSKKELIEYSYTHKKEKFLAIRFSIKEAIAKAIGISIFKNNFLNNCEIF YNKKKKIQLTTLGYIKKIFKKSQVKKIFLSVTDSNKHTYAIAILEK
Sequences:
>Translated_126_residues MAIIGIGIDVINIFRFKKLIINYGIKIPKKILSKKELIEYSYTHKKEKFLAIRFSIKEAIAKAIGISIFKNNFLNNCEIF YNKKKKIQLTTLGYIKKIFKKSQVKKIFLSVTDSNKHTYAIAILEK >Mature_125_residues AIIGIGIDVINIFRFKKLIINYGIKIPKKILSKKELIEYSYTHKKEKFLAIRFSIKEAIAKAIGISIFKNNFLNNCEIFY NKKKKIQLTTLGYIKKIFKKSQVKKIFLSVTDSNKHTYAIAILEK
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
Organism=Escherichia coli, GI1788916, Length=125, Percent_Identity=32, Blast_Score=77, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_BUCCC (Q057R6)
Other databases:
- EMBL: CP000263 - RefSeq: YP_802726.1 - ProteinModelPortal: Q057R6 - SMR: Q057R6 - STRING: Q057R6 - EnsemblBacteria: EBBUCT00000001560 - GeneID: 4441008 - GenomeReviews: CP000263_GR - KEGG: bcc:BCc_161 - eggNOG: COG0736 - GeneTree: EBGT00050000008114 - HOGENOM: HBG734479 - BioCyc: BAPH372461:BCC_161-MONOMER - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 14661; Mature: 14530
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIGIGIDVINIFRFKKLIINYGIKIPKKILSKKELIEYSYTHKKEKFLAIRFSIKEAI CEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHH AKAIGISIFKNNFLNNCEIFYNKKKKIQLTTLGYIKKIFKKSQVKKIFLSVTDSNKHTYA HHHHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCEEEE IAILEK EEEEEC >Mature Secondary Structure AIIGIGIDVINIFRFKKLIINYGIKIPKKILSKKELIEYSYTHKKEKFLAIRFSIKEAI EEEEECHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHH AKAIGISIFKNNFLNNCEIFYNKKKKIQLTTLGYIKKIFKKSQVKKIFLSVTDSNKHTYA HHHHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCEEEE IAILEK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA