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The map label for this gene is era

Identifier: 116515098

GI number: 116515098

Start: 188326

End: 189219

Strand: Reverse

Name: era

Synonym: BCc_162

Alternate gene names: 116515098

Gene position: 189219-188326 (Counterclockwise)

Preceding gene: 116515099

Following gene: 116515097

Centisome position: 45.44

GC content: 15.44

Gene sequence:

>894_bases
ATGCAAAAAAAAACTTTTTTTGGAAAAATTATCATAGTCGGAAGGACTAATGTTGGAAAATCTACATTATTAAATAAATT
AATTAAGTCTAATATATCAATTATATCACGTAAACCAAATACTACTCAGAAACATATTATAGGAATTTATACATATAAAT
TGTTTCAATTTGAAATTTTTGATTCTCCAGGATTACAAGATAAATATCATAATATTATCGAAAAAAAAAAAATACGTGAT
ACATTTAATTTAATTAATGAATCAGATATAATAATTTTTTTAATTACAAACTTTATTTGGAAAAATATAGAAATTAAAAT
ACTTAATTTTATTCAAAAAAAAAAAAAAAAATATATTATTGTAATTAATAAAATTGATTTAATTACTGAAAAAAAAAAAT
TATTACCTTTTATATTAAAAATAAGTAAATTCGCGCCTAATAGTGAAATTATTTTAATTTCAGCGAAAAAAAAGAAATTT
TTAGATATTTTATTAACTAATATTAAAAAAAAATTACCTATAGCTAATCATAAATATATCTCTACAAAAAAAACTATTTA
TAAAGAAAAATTTTTGATTACAGAAATAATTAGAAAAACTTTAATGCATTTATTATATAAAGAATTAGTATATTCATTTA
TAATATCAGATGTTATCTTAAATAAGAATATTAAAAATAAATATATTATTTTTTGTATAATTATTGTTAATAATAAAAGA
CATAAAAAAATTATTATCGGAAAACATGGAGAAAAAATTCAAAAATGTATACTTTATTCAATAAAAAAAATAGAAAAAAC
ATTTAAAAAAAAAACATTATTAAAAATAAAAATTAAAATTAAAAAAAATAAATTTAAAAAGGAAGAAAATGGCAATTATA
GGAATTGGAATTGA

Upstream 100 bases:

>100_bases
GATTATCAGAATTATTAATTGGAATAGGTGCAAGTAGAAGAAAAGCAGAACAAGATGCAGCACAAAATGCATTAATTAGA
TTAGAGGTAGAATAAAAATA

Downstream 100 bases:

>100_bases
TGTTATTAATATTTTTAGATTTAAAAAATTAATTATTAATTATGGAATCAAAATCCCTAAAAAAATTTTATCAAAAAAGG
AATTAATTGAATATTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQKKTFFGKIIIVGRTNVGKSTLLNKLIKSNISIISRKPNTTQKHIIGIYTYKLFQFEIFDSPGLQDKYHNIIEKKKIRD
TFNLINESDIIIFLITNFIWKNIEIKILNFIQKKKKKYIIVINKIDLITEKKKLLPFILKISKFAPNSEIILISAKKKKF
LDILLTNIKKKLPIANHKYISTKKTIYKEKFLITEIIRKTLMHLLYKELVYSFIISDVILNKNIKNKYIIFCIIIVNNKR
HKKIIIGKHGEKIQKCILYSIKKIEKTFKKKTLLKIKIKIKKNKFKKEENGNYRNWN

Sequences:

>Translated_297_residues
MQKKTFFGKIIIVGRTNVGKSTLLNKLIKSNISIISRKPNTTQKHIIGIYTYKLFQFEIFDSPGLQDKYHNIIEKKKIRD
TFNLINESDIIIFLITNFIWKNIEIKILNFIQKKKKKYIIVINKIDLITEKKKLLPFILKISKFAPNSEIILISAKKKKF
LDILLTNIKKKLPIANHKYISTKKTIYKEKFLITEIIRKTLMHLLYKELVYSFIISDVILNKNIKNKYIIFCIIIVNNKR
HKKIIIGKHGEKIQKCILYSIKKIEKTFKKKTLLKIKIKIKKNKFKKEENGNYRNWN
>Mature_297_residues
MQKKTFFGKIIIVGRTNVGKSTLLNKLIKSNISIISRKPNTTQKHIIGIYTYKLFQFEIFDSPGLQDKYHNIIEKKKIRD
TFNLINESDIIIFLITNFIWKNIEIKILNFIQKKKKKYIIVINKIDLITEKKKLLPFILKISKFAPNSEIILISAKKKKF
LDILLTNIKKKLPIANHKYISTKKTIYKEKFLITEIIRKTLMHLLYKELVYSFIISDVILNKNIKNKYIIFCIIIVNNKR
HKKIIIGKHGEKIQKCILYSIKKIEKTFKKKTLLKIKIKIKKNKFKKEENGNYRNWN

Specific function: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism

COG id: COG1159

COG function: function code R; GTPase

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH type-2 domain

Homologues:

Organism=Escherichia coli, GI1788919, Length=285, Percent_Identity=32.6315789473684, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ERA_BUCCC (Q057R5)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802727.1
- ProteinModelPortal:   Q057R5
- SMR:   Q057R5
- STRING:   Q057R5
- EnsemblBacteria:   EBBUCT00000001443
- GeneID:   4441009
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_162
- eggNOG:   COG1159
- GeneTree:   EBGT00050000007774
- HOGENOM:   HBG561652
- OMA:   NATERVE
- BioCyc:   BAPH372461:BCC_162-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00367
- InterPro:   IPR005662
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR002917
- InterPro:   IPR005225
- Gene3D:   G3DSA:3.30.300.20
- TIGRFAMs:   TIGR00436
- TIGRFAMs:   TIGR00231

Pfam domain/function: PF01926 MMR_HSR1; SSF54814 KH_prok

EC number: NA

Molecular weight: Translated: 35328; Mature: 35328

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: PS50823 KH_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKTFFGKIIIVGRTNVGKSTLLNKLIKSNISIISRKPNTTQKHIIGIYTYKLFQFEIF
CCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCHHHEEEEEEEEEEEEEEE
DSPGLQDKYHNIIEKKKIRDTFNLINESDIIIFLITNFIWKNIEIKILNFIQKKKKKYII
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHCCCCEEE
VINKIDLITEKKKLLPFILKISKFAPNSEIILISAKKKKFLDILLTNIKKKLPIANHKYI
EEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEE
STKKTIYKEKFLITEIIRKTLMHLLYKELVYSFIISDVILNKNIKNKYIIFCIIIVNNKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
HKKIIIGKHGEKIQKCILYSIKKIEKTFKKKTLLKIKIKIKKNKFKKEENGNYRNWN
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKKTFFGKIIIVGRTNVGKSTLLNKLIKSNISIISRKPNTTQKHIIGIYTYKLFQFEIF
CCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCHHHEEEEEEEEEEEEEEE
DSPGLQDKYHNIIEKKKIRDTFNLINESDIIIFLITNFIWKNIEIKILNFIQKKKKKYII
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHCCCCEEE
VINKIDLITEKKKLLPFILKISKFAPNSEIILISAKKKKFLDILLTNIKKKLPIANHKYI
EEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEE
STKKTIYKEKFLITEIIRKTLMHLLYKELVYSFIISDVILNKNIKNKYIIFCIIIVNNKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
HKKIIIGKHGEKIQKCILYSIKKIEKTFKKKTLLKIKIKIKKNKFKKEENGNYRNWN
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA