Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is thrA [H]
Identifier: 116515067
GI number: 116515067
Start: 143574
End: 146036
Strand: Reverse
Name: thrA [H]
Synonym: BCc_127
Alternate gene names: 116515067
Gene position: 146036-143574 (Counterclockwise)
Preceding gene: 116515068
Following gene: 116515066
Centisome position: 35.07
GC content: 18.8
Gene sequence:
>2463_bases ATGAAAACATTAAAATTTGGAGGTACTTCACTTGCAAACGCAAAAAAATTTATACAAGTATCTTCAATTATAATTCAAAA ATTAAATCATGATCAAATATCTGTTGTATTATCTGCACCTGCTACTATTACAAATTATTTAGAAGATTCTATTAAACTCT TTGTTAAAAAAAAAATTATTCCTAGTAAAATCTTAAGAATAATTAAAAATTTTTTTTTAAATATAATTTTAAATATTTAT AAAAAAGAAAAAGAATACCCAATAAAAAAACTAAATAAAAAAATCATTAAAAAACACAAAAAACTAAAAAAAATATTTAA AAAAATTAAAATTTTACAAAAATGTTCAGAAAAAAAACAAGCACGAATAATTAGTACAGGAGAAAATGTTTCTGTTTTAC TAATGAAAGAATTATTACAAATAAAAGGATTTAACACAATCATTATTAATCCTATAAAATATTTTTTAGCAAATAATAAT TATTTAAATGCAAATGTAAATATTAAAAAATCCAAAAAAAACTTTGAAAAATTAAAAATTTCAAAAAAAAAAATTATTCT TATGCCTGGATTTATAGCCGGAAATAATAAAAAAGAATTAGTAGTTTTAGGAAGAAACGGATCTGATTATTCTGCAAGCA TTTTATCTATTTGTACAAATTCTAATATATGTGAAATTTGGACTGATGTAAATGGAATTTATACAGGTGATCCAAATATT ATAAAAAAAGCTCAATTAGTATCAAAGATTTCTTATCAAGAAGCATTAGAATTAGCTTATTTTGGTGCTAAAGTAATTCA TCCGTCTACTATAGAACCATTAAAAAAAAATAATATTTGTTGTATTATTAAAAATACAAATAATCCAGAGTATCCAGGAA CTAAAATAATAAATAGAAAAAAGACAAAAAAAGAAAAAAAAAATCAAATAAAAGGAATTACATATCTAAAAAACATTATT TTTATAAAAATATTTTGTAAAAAAAATTTACAAATAAAAAAAGTTCTTAAAAAAATACTTTCATATTTTTTTAAGAAAAA TATACCATTATATTTATTAAATCAATCTCTATCACAAAATATAATTAGTTTTTATATACAAAAAAAAAACTTAATTTATA TCAAAAAAATAAAAAAACTATTAACTCTAAATATAAAAAGAAAAAGATTATTATCAATTATCAAAATAAAAAAATTAAGT ATTATAACAATTGTAGGATCTTTTTTAAAAAAATATACTACTAAAATTTTAGAAAAAATCCATTTAATTATCTATAGATT TAATAATAAAATATTTAATATTTCACATAATATATCAAATATATCTTTATCAATTGTAATTTATGATAAAAATGTTATAT CAATTATGAAAAAAATACATAACACAATTATAAATTATCATGTATCCATTAATATTTTTTTAATTGGTATAGGTGGAGTT GGTCTAGAATTTTTAAAAATATTTTTTAAACAAAGAGAAAGAATAAAAAAAAAATTTATTAAATTAAATATTAATCTTAT TGCAAATTCAAAAAAATATATTATTAGTAAAAAAAATATTAATTATAAAAAATGGGAAAAAAAATTTAAAAATTCTAAAA AAAAATTTTTATTAAAAAAAATTCTCCAAATTATTGAAAATAATGGTTATTTAAATCCTATTTTTATAGATTGTACAGCT AGTCAAGAAATTTCTAACAATTATAAAAAAATAATTAAATCCGGATGTCATATCATAACAGCTAATAAAAAATCTAATTC GTCATTAACATTACAATATACAGAAATTAGAAAAACAGCAAAAAAAAATAATAAAAAATTTTTTTATGAAACTCATGTCG GTGCGGGATTACCCATTCTTCAAAATTTTAAACATTTAATAGAATCAGGAGATAAATTAATCAAATTTCAAGGTATCCTT TCTGGTTCTATGTCATATATTTTCGGAGAATTAGATAATAATAATATTACATTATCACATGCTATTAAAAAAGCTCAAAA ATTAGGATTTACAGAACCACATCCAAAAGATGATCTTTCTGGAATTGATATTGCAAGAAAATTATTAATTTTAGCACGAG AAGCAGGATATTCAATAGAATTACCTGATATAAAAATAGAAAAAATTCTTCCAAATTCATTTAAAAAAATAAAAAATAAA AAAATATTTCTTAAAAAACTTAAAGAATTAGATAATTTATTTCTTCAAAAAATTATTCAAGCAAAAAAAGAAAAAAAAGT ACTTAGATGTATAGGAACAATAAATAAAAATGGAAATTGTTGTGTTAAAATACATTCCGTAAACTATAAAAATCCACTTT ATCATGTAAAAAATGGAGAAAACATATTTGTTTTTTATACTAAATATTATCAACCGATTCCTTTAATAATACGTGGTTAT GGAGCAGGGAATAAAGTTACAGCATCAGGAATTTTCTCTGATTTATTACGCATTGTATTATAA
Upstream 100 bases:
>100_bases ATAATAATCATAATACTATAAAAAATATACATTATAAAACTACTATAAATACGATATATAAAAAAAATTTAAACAATAAT TTAAAAATGAGATTATTTTT
Downstream 100 bases:
>100_bases TCTTATGAGTTTAAAAATAATGATAAAAATTTATGCTCCTGCTTCTATTGGAAATGTAGGTGTTGGTTTTGATATTTTAG GAATAGCTATCAAACCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: AK-HD; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MKTLKFGGTSLANAKKFIQVSSIIIQKLNHDQISVVLSAPATITNYLEDSIKLFVKKKIIPSKILRIIKNFFLNIILNIY KKEKEYPIKKLNKKIIKKHKKLKKIFKKIKILQKCSEKKQARIISTGENVSVLLMKELLQIKGFNTIIINPIKYFLANNN YLNANVNIKKSKKNFEKLKISKKKIILMPGFIAGNNKKELVVLGRNGSDYSASILSICTNSNICEIWTDVNGIYTGDPNI IKKAQLVSKISYQEALELAYFGAKVIHPSTIEPLKKNNICCIIKNTNNPEYPGTKIINRKKTKKEKKNQIKGITYLKNII FIKIFCKKNLQIKKVLKKILSYFFKKNIPLYLLNQSLSQNIISFYIQKKNLIYIKKIKKLLTLNIKRKRLLSIIKIKKLS IITIVGSFLKKYTTKILEKIHLIIYRFNNKIFNISHNISNISLSIVIYDKNVISIMKKIHNTIINYHVSINIFLIGIGGV GLEFLKIFFKQRERIKKKFIKLNINLIANSKKYIISKKNINYKKWEKKFKNSKKKFLLKKILQIIENNGYLNPIFIDCTA SQEISNNYKKIIKSGCHIITANKKSNSSLTLQYTEIRKTAKKNNKKFFYETHVGAGLPILQNFKHLIESGDKLIKFQGIL SGSMSYIFGELDNNNITLSHAIKKAQKLGFTEPHPKDDLSGIDIARKLLILAREAGYSIELPDIKIEKILPNSFKKIKNK KIFLKKLKELDNLFLQKIIQAKKEKKVLRCIGTINKNGNCCVKIHSVNYKNPLYHVKNGENIFVFYTKYYQPIPLIIRGY GAGNKVTASGIFSDLLRIVL
Sequences:
>Translated_820_residues MKTLKFGGTSLANAKKFIQVSSIIIQKLNHDQISVVLSAPATITNYLEDSIKLFVKKKIIPSKILRIIKNFFLNIILNIY KKEKEYPIKKLNKKIIKKHKKLKKIFKKIKILQKCSEKKQARIISTGENVSVLLMKELLQIKGFNTIIINPIKYFLANNN YLNANVNIKKSKKNFEKLKISKKKIILMPGFIAGNNKKELVVLGRNGSDYSASILSICTNSNICEIWTDVNGIYTGDPNI IKKAQLVSKISYQEALELAYFGAKVIHPSTIEPLKKNNICCIIKNTNNPEYPGTKIINRKKTKKEKKNQIKGITYLKNII FIKIFCKKNLQIKKVLKKILSYFFKKNIPLYLLNQSLSQNIISFYIQKKNLIYIKKIKKLLTLNIKRKRLLSIIKIKKLS IITIVGSFLKKYTTKILEKIHLIIYRFNNKIFNISHNISNISLSIVIYDKNVISIMKKIHNTIINYHVSINIFLIGIGGV GLEFLKIFFKQRERIKKKFIKLNINLIANSKKYIISKKNINYKKWEKKFKNSKKKFLLKKILQIIENNGYLNPIFIDCTA SQEISNNYKKIIKSGCHIITANKKSNSSLTLQYTEIRKTAKKNNKKFFYETHVGAGLPILQNFKHLIESGDKLIKFQGIL SGSMSYIFGELDNNNITLSHAIKKAQKLGFTEPHPKDDLSGIDIARKLLILAREAGYSIELPDIKIEKILPNSFKKIKNK KIFLKKLKELDNLFLQKIIQAKKEKKVLRCIGTINKNGNCCVKIHSVNYKNPLYHVKNGENIFVFYTKYYQPIPLIIRGY GAGNKVTASGIFSDLLRIVL >Mature_820_residues MKTLKFGGTSLANAKKFIQVSSIIIQKLNHDQISVVLSAPATITNYLEDSIKLFVKKKIIPSKILRIIKNFFLNIILNIY KKEKEYPIKKLNKKIIKKHKKLKKIFKKIKILQKCSEKKQARIISTGENVSVLLMKELLQIKGFNTIIINPIKYFLANNN YLNANVNIKKSKKNFEKLKISKKKIILMPGFIAGNNKKELVVLGRNGSDYSASILSICTNSNICEIWTDVNGIYTGDPNI IKKAQLVSKISYQEALELAYFGAKVIHPSTIEPLKKNNICCIIKNTNNPEYPGTKIINRKKTKKEKKNQIKGITYLKNII FIKIFCKKNLQIKKVLKKILSYFFKKNIPLYLLNQSLSQNIISFYIQKKNLIYIKKIKKLLTLNIKRKRLLSIIKIKKLS IITIVGSFLKKYTTKILEKIHLIIYRFNNKIFNISHNISNISLSIVIYDKNVISIMKKIHNTIINYHVSINIFLIGIGGV GLEFLKIFFKQRERIKKKFIKLNINLIANSKKYIISKKNINYKKWEKKFKNSKKKFLLKKILQIIENNGYLNPIFIDCTA SQEISNNYKKIIKSGCHIITANKKSNSSLTLQYTEIRKTAKKNNKKFFYETHVGAGLPILQNFKHLIESGDKLIKFQGIL SGSMSYIFGELDNNNITLSHAIKKAQKLGFTEPHPKDDLSGIDIARKLLILAREAGYSIELPDIKIEKILPNSFKKIKNK KIFLKKLKELDNLFLQKIIQAKKEKKVLRCIGTINKNGNCCVKIHSVNYKNPLYHVKNGENIFVFYTKYYQPIPLIIRGY GAGNKVTASGIFSDLLRIVL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=821, Percent_Identity=38.489646772229, Blast_Score=652, Evalue=0.0, Organism=Escherichia coli, GI1790376, Length=824, Percent_Identity=25.2427184466019, Blast_Score=322, Evalue=5e-89, Organism=Escherichia coli, GI1790455, Length=471, Percent_Identity=23.7791932059448, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322599, Length=340, Percent_Identity=32.9411764705882, Blast_Score=174, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6320893, Length=506, Percent_Identity=24.3083003952569, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 94499; Mature: 94499
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKFGGTSLANAKKFIQVSSIIIQKLNHDQISVVLSAPATITNYLEDSIKLFVKKKII CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC PSKILRIIKNFFLNIILNIYKKEKEYPIKKLNKKIIKKHKKLKKIFKKIKILQKCSEKKQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIISTGENVSVLLMKELLQIKGFNTIIINPIKYFLANNNYLNANVNIKKSKKNFEKLKI CEEEECCCCEEHHHHHHHHHHCCCCEEEECCHHHHEECCCEEEEEEEEECCCCCHHHHEE SKKKIILMPGFIAGNNKKELVVLGRNGSDYSASILSICTNSNICEIWTDVNGIYTGDPNI CCCEEEEECCEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCEECCCCHH IKKAQLVSKISYQEALELAYFGAKVIHPSTIEPLKKNNICCIIKNTNNPEYPGTKIINRK HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCH KTKKEKKNQIKGITYLKNIIFIKIFCKKNLQIKKVLKKILSYFFKKNIPLYLLNQSLSQN HHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHH IISFYIQKKNLIYIKKIKKLLTLNIKRKRLLSIIKIKKLSIITIVGSFLKKYTTKILEKI HHHHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLIIYRFNNKIFNISHNISNISLSIVIYDKNVISIMKKIHNTIINYHVSINIFLIGIGGV HHEEEEECCEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHEEEEEEEEEEEEEECCH GLEFLKIFFKQRERIKKKFIKLNINLIANSKKYIISKKNINYKKWEKKFKNSKKKFLLKK HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEEEECCCCHHHHHHHHHCHHHHHHHHH ILQIIENNGYLNPIFIDCTASQEISNNYKKIIKSGCHIITANKKSNSSLTLQYTEIRKTA HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHHH KKNNKKFFYETHVGAGLPILQNFKHLIESGDKLIKFQGILSGSMSYIFGELDNNNITLSH HCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCEEEEEEECCCCEEHHH AIKKAQKLGFTEPHPKDDLSGIDIARKLLILAREAGYSIELPDIKIEKILPNSFKKIKNK HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEHHHCCHHHHHHCCH KIFLKKLKELDNLFLQKIIQAKKEKKVLRCIGTINKNGNCCVKIHSVNYKNPLYHVKNGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCC NIFVFYTKYYQPIPLIIRGYGAGNKVTASGIFSDLLRIVL EEEEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHC >Mature Secondary Structure MKTLKFGGTSLANAKKFIQVSSIIIQKLNHDQISVVLSAPATITNYLEDSIKLFVKKKII CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC PSKILRIIKNFFLNIILNIYKKEKEYPIKKLNKKIIKKHKKLKKIFKKIKILQKCSEKKQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIISTGENVSVLLMKELLQIKGFNTIIINPIKYFLANNNYLNANVNIKKSKKNFEKLKI CEEEECCCCEEHHHHHHHHHHCCCCEEEECCHHHHEECCCEEEEEEEEECCCCCHHHHEE SKKKIILMPGFIAGNNKKELVVLGRNGSDYSASILSICTNSNICEIWTDVNGIYTGDPNI CCCEEEEECCEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCEECCCCHH IKKAQLVSKISYQEALELAYFGAKVIHPSTIEPLKKNNICCIIKNTNNPEYPGTKIINRK HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCH KTKKEKKNQIKGITYLKNIIFIKIFCKKNLQIKKVLKKILSYFFKKNIPLYLLNQSLSQN HHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHH IISFYIQKKNLIYIKKIKKLLTLNIKRKRLLSIIKIKKLSIITIVGSFLKKYTTKILEKI HHHHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLIIYRFNNKIFNISHNISNISLSIVIYDKNVISIMKKIHNTIINYHVSINIFLIGIGGV HHEEEEECCEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHEEEEEEEEEEEEEECCH GLEFLKIFFKQRERIKKKFIKLNINLIANSKKYIISKKNINYKKWEKKFKNSKKKFLLKK HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEEEECCCCHHHHHHHHHCHHHHHHHHH ILQIIENNGYLNPIFIDCTASQEISNNYKKIIKSGCHIITANKKSNSSLTLQYTEIRKTA HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHHH KKNNKKFFYETHVGAGLPILQNFKHLIESGDKLIKFQGILSGSMSYIFGELDNNNITLSH HCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCEEEEEEECCCCEEHHH AIKKAQKLGFTEPHPKDDLSGIDIARKLLILAREAGYSIELPDIKIEKILPNSFKKIKNK HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEHHHCCHHHHHHCCH KIFLKKLKELDNLFLQKIIQAKKEKKVLRCIGTINKNGNCCVKIHSVNYKNPLYHVKNGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCC NIFVFYTKYYQPIPLIIRGYGAGNKVTASGIFSDLLRIVL EEEEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]