Click here to switch to the map view.

The map label for this gene is nuoJ [H]

Identifier: 116515046

GI number: 116515046

Start: 120421

End: 120906

Strand: Direct

Name: nuoJ [H]

Synonym: BCc_105

Alternate gene names: 116515046

Gene position: 120421-120906 (Clockwise)

Preceding gene: 116515045

Following gene: 116515047

Centisome position: 28.92

GC content: 15.43

Gene sequence:

>486_bases
ATGGCAATCTCTTTTTGGTTATTTTCATTTTTAGCAGTTTTTTTTTCTATTTTAATAATGATTAGTATAAATTTAATTTA
TTCTTTAATATATTTAATATTATTAATATTTTCTATTGCTAGTATTTTTTGTGTATTAGGTCTTTCATTTATAGGTGTAT
TAGAGGTTATTATTTATGCTGGAGCGATTACGGTTTTGTTTATTTTAATAGCAATTTTAATGCGACCTAAAAGATTTAGT
AGGAATTTTTTTTTTAATAATTTAAAAAATTTTTTTTATTTTTCTTCTCTTTTTTTTACTATATTAATTTTTTTTATATT
TTTTATACAAATTAATAGTAATAAAGATAAATTTTTCTTTTATAAAAAATTTTTAATTCAAGATATTTGTTTATGTTTAT
TTAATAAATATTTGTTTTTAATAGAATTTTCTTCATTATTATTATTATCTTCTGTATTATTAGTTTGTTTTTTTTTAAGA
AAATAA

Upstream 100 bases:

>100_bases
GGGGTTAATACAACGTATGATTTAAAAAAAAATCTTTCAAAAAAAATATCAAATTGTGTTGATGTAACTGATTTATTACC
ATAATTAAGGATAATTTTTC

Downstream 100 bases:

>100_bases
TTTTTATATAATATTTAATAGGATAATATACAATTATGTTGTCATTAAATTATGGATTTACCATATCAATTATTTTATTT
TTTATAGGTATTATTTCTTT

Product: NADH dehydrogenase I chain J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAISFWLFSFLAVFFSILIMISINLIYSLIYLILLIFSIASIFCVLGLSFIGVLEVIIYAGAITVLFILIAILMRPKRFS
RNFFFNNLKNFFYFSSLFFTILIFFIFFIQINSNKDKFFFYKKFLIQDICLCLFNKYLFLIEFSSLLLLSSVLLVCFFLR
K

Sequences:

>Translated_161_residues
MAISFWLFSFLAVFFSILIMISINLIYSLIYLILLIFSIASIFCVLGLSFIGVLEVIIYAGAITVLFILIAILMRPKRFS
RNFFFNNLKNFFYFSSLFFTILIFFIFFIQINSNKDKFFFYKKFLIQDICLCLFNKYLFLIEFSSLLLLSSVLLVCFFLR
K
>Mature_160_residues
AISFWLFSFLAVFFSILIMISINLIYSLIYLILLIFSIASIFCVLGLSFIGVLEVIIYAGAITVLFILIAILMRPKRFSR
NFFFNNLKNFFYFSSLFFTILIFFIFFIQINSNKDKFFFYKKFLIQDICLCLFNKYLFLIEFSSLLLLSSVLLVCFFLRK

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=161, Percent_Identity=24.8447204968944, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 19068; Mature: 18936

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISFWLFSFLAVFFSILIMISINLIYSLIYLILLIFSIASIFCVLGLSFIGVLEVIIYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAITVLFILIAILMRPKRFSRNFFFNNLKNFFYFSSLFFTILIFFIFFIQINSNKDKFFF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YKKFLIQDICLCLFNKYLFLIEFSSLLLLSSVLLVCFFLRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AISFWLFSFLAVFFSILIMISINLIYSLIYLILLIFSIASIFCVLGLSFIGVLEVIIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAITVLFILIAILMRPKRFSRNFFFNNLKNFFYFSSLFFTILIFFIFFIQINSNKDKFFF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YKKFLIQDICLCLFNKYLFLIEFSSLLLLSSVLLVCFFLRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]