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The map label for this gene is glyQ [H]

Identifier: 116515027

GI number: 116515027

Start: 94827

End: 95708

Strand: Reverse

Name: glyQ [H]

Synonym: BCc_086

Alternate gene names: 116515027

Gene position: 95708-94827 (Counterclockwise)

Preceding gene: 116515031

Following gene: 116515026

Centisome position: 22.99

GC content: 22.34

Gene sequence:

>882_bases
ATGAAAAAATTTAAATATTCATTTTATGAAATAATTCAAAAACTACAAAATTTTTGGTATAAAAAAAAATGTACAATTAT
GCAACCATTAGATATATCTATAGGTGCTGGAACATTTCATCATCATACATTCTTTAATATTCTAAAAAGAGAACCGATAC
ATATCGCGTATGTACAACCATCAAGAAGACCATCCGATGGAAGATATACAAAAAATCCAAATAGATTACAACATTATTAT
CAATTTCAAGTAATTATTAAACCAATTCCTAAAAACGTACAAAAATTGTTTTTATCATCTCTAAAAAATATAGGAATAGA
TATATACAATAATGATATTAGATTTTTAGAAGACAATTGGGAAAATCCTACTATAGGAGCTTCTGGTTTAGGATGGGAAA
TTTGGTTAAATGGTGTAGAAATTACTCAAATTACATATTTTCAACAAATGGGAGGTATTAATAATATACAACCAGCAATT
GAAATTACTTACGGATTAGAAAGAATTGCTATGCATATACAAAATATAAATAATATTTATAATATTATTTGGAATAAAAA
ATCAGAAAAAAAAATTCAATATTCTGATATATTTTTGTTACATGAAAAAGAAAATTCATTATACAATTTTGAACATTCAA
ATATTATTTTTTTATTAAAATTATTTAAAATGCATATAGAAGAAGCAAAAAGACTTATAAATTTATCTAAATCTTTATCT
ATACCGGCATATGAACAAATGTTATATTCAATTCATTATTTTAATTTACTAGACTGTAAAAAAACGTTATCTACTACTGA
ACGAACAAATTATATTCTATGTATACGGAAAATAATCAAAAAAATTGCTGAAAAATATATTAATATAAACGTTAAAGAGT
AA

Upstream 100 bases:

>100_bases
ATATTCCAAAATTTTAAAAAAAAATTATATTAATTTAATAATATTAAAATTTTAATTTTTTTTAAAAAATACTTTAAATA
TACCTATTAAAAGAAGAAAA

Downstream 100 bases:

>100_bases
AAAATGAATCAAAAAATATTATTAATCGAAATACAAACAGAAGATTTACCTAGTAAAGAATTAAAAAACATAGCAAATTT
TTTTTATTATATTTTTAAAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKKFKYSFYEIIQKLQNFWYKKKCTIMQPLDISIGAGTFHHHTFFNILKREPIHIAYVQPSRRPSDGRYTKNPNRLQHYY
QFQVIIKPIPKNVQKLFLSSLKNIGIDIYNNDIRFLEDNWENPTIGASGLGWEIWLNGVEITQITYFQQMGGINNIQPAI
EITYGLERIAMHIQNINNIYNIIWNKKSEKKIQYSDIFLLHEKENSLYNFEHSNIIFLLKLFKMHIEEAKRLINLSKSLS
IPAYEQMLYSIHYFNLLDCKKTLSTTERTNYILCIRKIIKKIAEKYININVKE

Sequences:

>Translated_293_residues
MKKFKYSFYEIIQKLQNFWYKKKCTIMQPLDISIGAGTFHHHTFFNILKREPIHIAYVQPSRRPSDGRYTKNPNRLQHYY
QFQVIIKPIPKNVQKLFLSSLKNIGIDIYNNDIRFLEDNWENPTIGASGLGWEIWLNGVEITQITYFQQMGGINNIQPAI
EITYGLERIAMHIQNINNIYNIIWNKKSEKKIQYSDIFLLHEKENSLYNFEHSNIIFLLKLFKMHIEEAKRLINLSKSLS
IPAYEQMLYSIHYFNLLDCKKTLSTTERTNYILCIRKIIKKIAEKYININVKE
>Mature_293_residues
MKKFKYSFYEIIQKLQNFWYKKKCTIMQPLDISIGAGTFHHHTFFNILKREPIHIAYVQPSRRPSDGRYTKNPNRLQHYY
QFQVIIKPIPKNVQKLFLSSLKNIGIDIYNNDIRFLEDNWENPTIGASGLGWEIWLNGVEITQITYFQQMGGINNIQPAI
EITYGLERIAMHIQNINNIYNIIWNKKSEKKIQYSDIFLLHEKENSLYNFEHSNIIFLLKLFKMHIEEAKRLINLSKSLS
IPAYEQMLYSIHYFNLLDCKKTLSTTERTNYILCIRKIIKKIAEKYININVKE

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=287, Percent_Identity=53.6585365853659, Blast_Score=343, Evalue=6e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34937; Mature: 34937

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFKYSFYEIIQKLQNFWYKKKCTIMQPLDISIGAGTFHHHTFFNILKREPIHIAYVQP
CCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHCCCEEEEEECC
SRRPSDGRYTKNPNRLQHYYQFQVIIKPIPKNVQKLFLSSLKNIGIDIYNNDIRFLEDNW
CCCCCCCCCCCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHHHCCEEEECCCEEEEECCC
ENPTIGASGLGWEIWLNGVEITQITYFQQMGGINNIQPAIEITYGLERIAMHIQNINNIY
CCCCCCCCCCCCEEEECCEEEEHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
NIIWNKKSEKKIQYSDIFLLHEKENSLYNFEHSNIIFLLKLFKMHIEEAKRLINLSKSLS
HHHCCCCCCCEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
IPAYEQMLYSIHYFNLLDCKKTLSTTERTNYILCIRKIIKKIAEKYININVKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MKKFKYSFYEIIQKLQNFWYKKKCTIMQPLDISIGAGTFHHHTFFNILKREPIHIAYVQP
CCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHCCCEEEEEECC
SRRPSDGRYTKNPNRLQHYYQFQVIIKPIPKNVQKLFLSSLKNIGIDIYNNDIRFLEDNW
CCCCCCCCCCCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHHHCCEEEECCCEEEEECCC
ENPTIGASGLGWEIWLNGVEITQITYFQQMGGINNIQPAIEITYGLERIAMHIQNINNIY
CCCCCCCCCCCCEEEECCEEEEHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
NIIWNKKSEKKIQYSDIFLLHEKENSLYNFEHSNIIFLLKLFKMHIEEAKRLINLSKSLS
HHHCCCCCCCEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
IPAYEQMLYSIHYFNLLDCKKTLSTTERTNYILCIRKIIKKIAEKYININVKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]