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The map label for this gene is infC [H]

Identifier: 116515020

GI number: 116515020

Start: 87438

End: 87974

Strand: Direct

Name: infC [H]

Synonym: BCc_079

Alternate gene names: 116515020

Gene position: 87438-87974 (Clockwise)

Preceding gene: 116515019

Following gene: 116515021

Centisome position: 21.0

GC content: 25.14

Gene sequence:

>537_bases
ATTAAAGGCAGAAAAAAAAATCAATTATTACGTTCTCATCGTATTAATAATGAGATTCGTTCTACAGAAGTTCGATTAAT
GGGTTTAAAAGGTGAACAATTAGGTATTATTAATATTCATAAAGCTTTAGAAGAAGCTAAAATTTGTGGATTTGATTTAG
TTGAAATTAGTCCAAATTCTAAGCCTCCTGTATGTCGTATTATGAATTATGGTAAATTTTTGTATGAAAAAAGTAAGGCT
CTTAAAAAACAAAAGAAAAAACAAAAGATTATTCAAATTAAGGAAGTGAAATTTAGACCTAATACAGATAAAGGTGATTA
TCAAGTTAAATTAAGAAATTTAATACGTTTTTTAAAATGTGGTAATAAAGTAAAAATTACTTTAAGATTTAGAGGTAGAG
AAATGGCACATCAAAATATTGGAATAAATATGTTACATCGACTAGAACATGATTTATCTTATTTAGCTATAATAGAATCA
TTCCCAAAAAGAATTGAAGGACGTCAAATGACAATGATTTTATCTCCAAAAAAATAA

Upstream 100 bases:

>100_bases
TAATATTCAATATAAACAAAATATCAATTTTTTTATTAAAAAAATTATTAATAATGTTAATAGTTTTAGTATACAAGATT
GTAATATGGAGGATTAGAGT

Downstream 100 bases:

>100_bases
ATTTATTTATTTTTTAATATATATTTTGATATAAAAATTTTTTTAATATTATGGAATATTTATGCCTAAAATTAAAACAT
TACGTAGTGCTTCTAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKGRKKNQLLRSHRINNEIRSTEVRLMGLKGEQLGIINIHKALEEAKICGFDLVEISPNSKPPVCRIMNYGKFLYEKSKA
LKKQKKKQKIIQIKEVKFRPNTDKGDYQVKLRNLIRFLKCGNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIES
FPKRIEGRQMTMILSPKK

Sequences:

>Translated_178_residues
MKGRKKNQLLRSHRINNEIRSTEVRLMGLKGEQLGIINIHKALEEAKICGFDLVEISPNSKPPVCRIMNYGKFLYEKSKA
LKKQKKKQKIIQIKEVKFRPNTDKGDYQVKLRNLIRFLKCGNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIES
FPKRIEGRQMTMILSPKK
>Mature_178_residues
MKGRKKNQLLRSHRINNEIRSTEVRLMGLKGEQLGIINIHKALEEAKICGFDLVEISPNSKPPVCRIMNYGKFLYEKSKA
LKKQKKKQKIIQIKEVKFRPNTDKGDYQVKLRNLIRFLKCGNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIES
FPKRIEGRQMTMILSPKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=178, Percent_Identity=69.1011235955056, Blast_Score=241, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 20881; Mature: 20881

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRKKNQLLRSHRINNEIRSTEVRLMGLKGEQLGIINIHKALEEAKICGFDLVEISPNS
CCCCHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEECCCC
KPPVCRIMNYGKFLYEKSKALKKQKKKQKIIQIKEVKFRPNTDKGDYQVKLRNLIRFLKC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEECCCCCCCCEEEHHHHHHHHHHC
GNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIESFPKRIEGRQMTMILSPKK
CCEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MKGRKKNQLLRSHRINNEIRSTEVRLMGLKGEQLGIINIHKALEEAKICGFDLVEISPNS
CCCCHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEECCCC
KPPVCRIMNYGKFLYEKSKALKKQKKKQKIIQIKEVKFRPNTDKGDYQVKLRNLIRFLKC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEECCCCCCCCEEEHHHHHHHHHHC
GNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIESFPKRIEGRQMTMILSPKK
CCEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA