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The map label for this gene is yfcN [C]

Identifier: 116515004

GI number: 116515004

Start: 69362

End: 69898

Strand: Direct

Name: yfcN [C]

Synonym: BCc_062

Alternate gene names: 116515004

Gene position: 69362-69898 (Clockwise)

Preceding gene: 116515001

Following gene: 116515005

Centisome position: 16.66

GC content: 22.16

Gene sequence:

>537_bases
ATGAAAAAAAATAATTTAATTAATTCAAATGAAGCAGAAATTTTTTTATATCATATGAAAGGAGTTAAAAAAATTATTCA
AGATAAAATTTATCATATTAATTCTAATAATAAAAATTATAGGTCATATTATAAAAATATTTTAGAACAAGAAGCACATA
GTTATTATTTTAAAGATTTTGTAGATAGAAATTCTTTTTTTTTCACTAATAATCCTATTTGTTTTGTTCGTAATATGCGT
TATAATATTGATCTTAAAAAATTGAAAAAAGGAGAGTACGTACCAGAAATTGTTTTAGATTTACATGGAATGAATTTGTA
TCAGGCTAAAAAAGAATTAGGAAATGATATGATTTGTCATAAAGAAAATTTTTTATGCGCAAGTATTCTTCATGGATACG
GAAAAGGAATTTTACAAAAACATATTCCCTTTTGGTTGTCTAAACACCCTGATATTGTGGCTTTTCATCAAGCACCAAAA
ATATTTGGTAATGATGCAGCTATATTAATTTTTTTAAAAAATAATTATTCAGATTAA

Upstream 100 bases:

>100_bases
CTAAAAATTTGTTTAATTATATTTCTTTTTTATTAAAATAAATTATTTTATATATTTTTATATTTTATAAAATTTAGTAA
AAACTTTGGAAAATTTTTAT

Downstream 100 bases:

>100_bases
ATATGGAAATTATTAATTTAATATATTATAATTATAATAACTTGATTAAATTTATTTAATATTTCAATTTATTAGATTTT
TAATTATATTAAAAATTATT

Product: YfcN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKKNNLINSNEAEIFLYHMKGVKKIIQDKIYHINSNNKNYRSYYKNILEQEAHSYYFKDFVDRNSFFFTNNPICFVRNMR
YNIDLKKLKKGEYVPEIVLDLHGMNLYQAKKELGNDMICHKENFLCASILHGYGKGILQKHIPFWLSKHPDIVAFHQAPK
IFGNDAAILIFLKNNYSD

Sequences:

>Translated_178_residues
MKKNNLINSNEAEIFLYHMKGVKKIIQDKIYHINSNNKNYRSYYKNILEQEAHSYYFKDFVDRNSFFFTNNPICFVRNMR
YNIDLKKLKKGEYVPEIVLDLHGMNLYQAKKELGNDMICHKENFLCASILHGYGKGILQKHIPFWLSKHPDIVAFHQAPK
IFGNDAAILIFLKNNYSD
>Mature_178_residues
MKKNNLINSNEAEIFLYHMKGVKKIIQDKIYHINSNNKNYRSYYKNILEQEAHSYYFKDFVDRNSFFFTNNPICFVRNMR
YNIDLKKLKKGEYVPEIVLDLHGMNLYQAKKELGNDMICHKENFLCASILHGYGKGILQKHIPFWLSKHPDIVAFHQAPK
IFGNDAAILIFLKNNYSD

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=175, Percent_Identity=38.8571428571429, Blast_Score=143, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 21074; Mature: 21074

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNNLINSNEAEIFLYHMKGVKKIIQDKIYHINSNNKNYRSYYKNILEQEAHSYYFKDF
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VDRNSFFFTNNPICFVRNMRYNIDLKKLKKGEYVPEIVLDLHGMNLYQAKKELGNDMICH
HCCCCEEEECCCEEEEECCEECCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEE
KENFLCASILHGYGKGILQKHIPFWLSKHPDIVAFHQAPKIFGNDAAILIFLKNNYSD
CCCCHHHHHHHHHCHHHHHHHCCHHHCCCCCEEEEECCCCEECCCCEEEEEEECCCCC
>Mature Secondary Structure
MKKNNLINSNEAEIFLYHMKGVKKIIQDKIYHINSNNKNYRSYYKNILEQEAHSYYFKDF
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VDRNSFFFTNNPICFVRNMRYNIDLKKLKKGEYVPEIVLDLHGMNLYQAKKELGNDMICH
HCCCCEEEECCCEEEEECCEECCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEE
KENFLCASILHGYGKGILQKHIPFWLSKHPDIVAFHQAPKIFGNDAAILIFLKNNYSD
CCCCHHHHHHHHHCHHHHHHHCCHHHCCCCCEEEEECCCCEECCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9767718; 12089438 [H]