Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
---|---|
Accession | NC_008511 |
Length | 299,762 |
Click here to switch to the map view.
The map label for this gene is 116332564
Identifier: 116332564
GI number: 116332564
Start: 149977
End: 150876
Strand: Direct
Name: 116332564
Synonym: LBJ_4130
Alternate gene names: NA
Gene position: 149977-150876 (Clockwise)
Preceding gene: 116332563
Following gene: 116332565
Centisome position: 50.03
GC content: 42.56
Gene sequence:
>900_bases ATGAATATTAAACCTTTAAAAGAAACCACATTTTTAGAAGCGGTTGCCGCGGCAATTCAGCACGAAAAAGATTATTTCGA ATTTTATATGAACACATATGAAAAACTTCCTCCCGGGGACACCAAGGAACTTTTTGAAAGGCTAGCGGAAGAAGTGGACG ATCATATCAAATTTATTACGGAATTGTACGAGCAAGCGGAAGGATCCGAACTCCCGAATCTTAAACAACTCACCGCAATC CATAAGTTCCACGATTCGACTCTTCAAAAATTGATGAATAAGGTGGAAAGGACGATCGCGGGTCCGGGAAGCAAAGACGC ACACGAAGCGCTCGAACTTGCGATTCGAGAAGCGGAGAACAGCGTTTCTTTCTATGAAAAACTCGCAAACAAGTTCGAAG ACGTGAACATCAAATCTCTTTTCACGAAATTAAAAGACTACAGTCAAAACTATCAATCTCTTCTGGAAACCGAGCTGAAC GGATTGGATCAATCCGGTTCAGGTCAGGGAATTTTTTTTTGGGACGAACAAGCGGAAGAAGTGGCTAAGGCAGAGTCTAA ATCGGAAAAAACTCCGACTTCGAAAAAACCGAAGGCTGTTGCAAAACCCGCTGCTTCAACTCCAGTTGCAAAGACCTCTA CAACTAAAACTATAACTTCTCCAAAACCGGCTACGACTGCCAAATCCGTCGTAACGACGAGTGCAAAAAAAGCGACTCCT AAAAAGAAAGCTGCAAGTAAATCAGCGGTCAAAAAAGCCGCCCCAAAGAAAAAAGTGACGACCAAAAAAGCGCTTACAAA ACCGAGAAAGGCAGTGAAGAAAAGCGCAGCCAAAAAGGTTTCTCCCAAAAAATCGACTCCTAAAAAAAAGTCGGCGGCAA AGGCTAAGAAAAAAAGGTAA
Upstream 100 bases:
>100_bases GCGCAGTTTCTCATTTATGAATCTATGGCAGAAATTAAATAATTATTGATTCGGTCGGTAATGTAACTAAGATAGCAAAG AAATCGGGAGGAATCTTATC
Downstream 100 bases:
>100_bases TGCAATCCACCACGATCATCGATTGGAAAGAAATCCAAGATCTCTATCCCGTAAATCAGGAAATGATCTGGCTGAACAAT TGTGGAACAACTCCTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNIKPLKETTFLEAVAAAIQHEKDYFEFYMNTYEKLPPGDTKELFERLAEEVDDHIKFITELYEQAEGSELPNLKQLTAI HKFHDSTLQKLMNKVERTIAGPGSKDAHEALELAIREAENSVSFYEKLANKFEDVNIKSLFTKLKDYSQNYQSLLETELN GLDQSGSGQGIFFWDEQAEEVAKAESKSEKTPTSKKPKAVAKPAASTPVAKTSTTKTITSPKPATTAKSVVTTSAKKATP KKKAASKSAVKKAAPKKKVTTKKALTKPRKAVKKSAAKKVSPKKSTPKKKSAAKAKKKR
Sequences:
>Translated_299_residues MNIKPLKETTFLEAVAAAIQHEKDYFEFYMNTYEKLPPGDTKELFERLAEEVDDHIKFITELYEQAEGSELPNLKQLTAI HKFHDSTLQKLMNKVERTIAGPGSKDAHEALELAIREAENSVSFYEKLANKFEDVNIKSLFTKLKDYSQNYQSLLETELN GLDQSGSGQGIFFWDEQAEEVAKAESKSEKTPTSKKPKAVAKPAASTPVAKTSTTKTITSPKPATTAKSVVTTSAKKATP KKKAASKSAVKKAAPKKKVTTKKALTKPRKAVKKSAAKKVSPKKSTPKKKSAAKAKKKR >Mature_299_residues MNIKPLKETTFLEAVAAAIQHEKDYFEFYMNTYEKLPPGDTKELFERLAEEVDDHIKFITELYEQAEGSELPNLKQLTAI HKFHDSTLQKLMNKVERTIAGPGSKDAHEALELAIREAENSVSFYEKLANKFEDVNIKSLFTKLKDYSQNYQSLLETELN GLDQSGSGQGIFFWDEQAEEVAKAESKSEKTPTSKKPKAVAKPAASTPVAKTSTTKTITSPKPATTAKSVVTTSAKKATP KKKAASKSAVKKAAPKKKVTTKKALTKPRKAVKKSAAKKVSPKKSTPKKKSAAKAKKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33048; Mature: 33048
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKPLKETTFLEAVAAAIQHEKDYFEFYMNTYEKLPPGDTKELFERLAEEVDDHIKFIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ELYEQAEGSELPNLKQLTAIHKFHDSTLQKLMNKVERTIAGPGSKDAHEALELAIREAEN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SVSFYEKLANKFEDVNIKSLFTKLKDYSQNYQSLLETELNGLDQSGSGQGIFFWDEQAEE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHH VAKAESKSEKTPTSKKPKAVAKPAASTPVAKTSTTKTITSPKPATTAKSVVTTSAKKATP HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC KKKAASKSAVKKAAPKKKVTTKKALTKPRKAVKKSAAKKVSPKKSTPKKKSAAKAKKKR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MNIKPLKETTFLEAVAAAIQHEKDYFEFYMNTYEKLPPGDTKELFERLAEEVDDHIKFIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ELYEQAEGSELPNLKQLTAIHKFHDSTLQKLMNKVERTIAGPGSKDAHEALELAIREAEN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SVSFYEKLANKFEDVNIKSLFTKLKDYSQNYQSLLETELNGLDQSGSGQGIFFWDEQAEE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHH VAKAESKSEKTPTSKKPKAVAKPAASTPVAKTSTTKTITSPKPATTAKSVVTTSAKKATP HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC KKKAASKSAVKKAAPKKKVTTKKALTKPRKAVKKSAAKKVSPKKSTPKKKSAAKAKKKR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA