Click here to switch to the map view.

The map label for this gene is 116327937

Identifier: 116327937

GI number: 116327937

Start: 1441157

End: 1442500

Strand: Direct

Name: 116327937

Synonym: LBL_1226

Alternate gene names: NA

Gene position: 1441157-1442500 (Clockwise)

Preceding gene: 116327936

Following gene: 116327938

Centisome position: 39.87

GC content: 36.76

Gene sequence:

>1344_bases
ATGTTACAGAAACTTTACTCCCGTTATCCGAATTTAAAAGACATACTGTATAACAGCGGATGGCTTTTTTTTGATAAAAT
TTTCAGAATGGGCATGGGAATGTTCTTAGGAGTTTGGATCGCCCGCTATCTAGGTCCCGATAGTTATGGAAAGTTAAATT
ATGTAATCGCATATATAGCGTTGATCGGTAGTTTTACAAATTTAGGACTCGATGGTGTTGTAGTAAGAGAACTCATTAAG
GAGAAGGCCCATAAAGAAGAGATTCTTTCAACTTCGTTTTTACTACAACTTATTGCTGGGATAATTGCATTTGCAGTAGC
AATTCTACTTATTCCTCTTCTTAGGCCTGATGAATCGGATTTGTTCTGGATGGTATTTCTTGTCGGACTAACGTTAATTT
TTCGTGCCGTCAGTGTCGTAAGGTATTGGTACGAAGCGCAAGTGCTATCCAAATATTTTGTATGGCTTGATAACGGACTG
TTCTTCGTGTTTTCCGGAGTAAGGATTTTGTTGATTTTGAACGGTTTGGGAATATTTCCGTTCATTTGGACTGGTCTAAT
CGAATCATCCATTAGTTTATTCGGTTATTCTTTATTATATAAATATCATAATGGATCTTTATCCGTTCTTCACGCAAATT
GGAGAAGAGCGCGAACGTTATTGAGAGATAGTTGGATGTTGTTGCTTTCCGGATTGGCTGTAATTGTATATATGCGGATC
GATCAGATTATGATCGGTCAGATGATGGGAGACGAAGCGGTTGGAATATATACCGCGGCTGTTAAAATTAGCGAAGTTTG
GTATTTTATCCCTATGGCTGTCGCTTCGTCGATATTTCCCGCTATTTTAAAAGCGAAAGAGTTTAGTCAAGAATTATATC
TAGAGCGTTTAGGTCTTTTGCATTCATTTATGTTTTTACTAGCCCTGATGATAGCGATACCGATGACATTTTTATCGGAT
CCGATTATACGTCTATTTTTCGGAGAAAAATTTTCGGAAGCAGGAAACGTATTGGCGATTCATATTTGGGCTGGAATTTT
TGTTTTTTTAGGGGTAGCAAGTAGTCGATATTATTTAACTGAAAATTTACCAAAGGGTGAATTGTATAAAAGTATTTCCG
GTTGTATGACGAATATAATTCTAAATTACTTTTTGATTCCACTCTGCGGAATTAAAGGAGCCGCCATTGCTACGGTAATT
TCTCAATTTGTAGCGAGCACTTTATTTAATCTTCTATTCAAACGTACTCGCGAAATATTTTTTATCCAATTAGAATCGGT
TTTCTTTTGGAAAACGTTAAGTCGTCTCAATCATCTTAGAAGTTGGCTCCTTAAGGATGGTTGA

Upstream 100 bases:

>100_bases
TGGGAATCTCTGAATAATATTTGTCCATTTACCCAAGTATTGTCTTATCATTCTATAGTACAAGTAGGTTTTGAGACGTG
TTCCAAAATACTGAGAAATA

Downstream 100 bases:

>100_bases
AAAATGGTATTAGCGCCGATTGCACTTTTTGTTTATAATAGACCGGAGCATACAAAAAGAACGATCGATTCTTTATCAAA
CAACGATTATGCGGAGCAGT

Product: O-antigen flippase

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Family Protein; Lipopolysaccharide O-Side Chain Biosynthesis Protein; Capsular Polysaccharide Biosynthesis Protein; MatE Family; Oligosaccharide Transporter; Flippase Wzx; O-Antigen Transporter Related Protein; LPS Biosynthesis Related Polysaccharide Transporter; Heteropolysaccharide Repeat-Containing Protein; Polymerization And Export Protein; Polysaccharide Transporter PST Family; O-Antigen Transporter-Like Protein; O-Antigen Flippase; LPS Biosynthesis Related Flippase; Polysaccharide Biosynthesis Export Protein; O-Antigen And Teichoic Acid Export Protein; Oligosaccharide Translocase; Methyltransferase FkbM Family; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Transporter; Polysaccharide Biosynthesis Related Protein; Lipopolysaccharide/O-Antigen Transporter; PST Family Transporter

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MLQKLYSRYPNLKDILYNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIALIGSFTNLGLDGVVVRELIK
EKAHKEEILSTSFLLQLIAGIIAFAVAILLIPLLRPDESDLFWMVFLVGLTLIFRAVSVVRYWYEAQVLSKYFVWLDNGL
FFVFSGVRILLILNGLGIFPFIWTGLIESSISLFGYSLLYKYHNGSLSVLHANWRRARTLLRDSWMLLLSGLAVIVYMRI
DQIMIGQMMGDEAVGIYTAAVKISEVWYFIPMAVASSIFPAILKAKEFSQELYLERLGLLHSFMFLLALMIAIPMTFLSD
PIIRLFFGEKFSEAGNVLAIHIWAGIFVFLGVASSRYYLTENLPKGELYKSISGCMTNIILNYFLIPLCGIKGAAIATVI
SQFVASTLFNLLFKRTREIFFIQLESVFFWKTLSRLNHLRSWLLKDG

Sequences:

>Translated_447_residues
MLQKLYSRYPNLKDILYNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIALIGSFTNLGLDGVVVRELIK
EKAHKEEILSTSFLLQLIAGIIAFAVAILLIPLLRPDESDLFWMVFLVGLTLIFRAVSVVRYWYEAQVLSKYFVWLDNGL
FFVFSGVRILLILNGLGIFPFIWTGLIESSISLFGYSLLYKYHNGSLSVLHANWRRARTLLRDSWMLLLSGLAVIVYMRI
DQIMIGQMMGDEAVGIYTAAVKISEVWYFIPMAVASSIFPAILKAKEFSQELYLERLGLLHSFMFLLALMIAIPMTFLSD
PIIRLFFGEKFSEAGNVLAIHIWAGIFVFLGVASSRYYLTENLPKGELYKSISGCMTNIILNYFLIPLCGIKGAAIATVI
SQFVASTLFNLLFKRTREIFFIQLESVFFWKTLSRLNHLRSWLLKDG
>Mature_447_residues
MLQKLYSRYPNLKDILYNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIALIGSFTNLGLDGVVVRELIK
EKAHKEEILSTSFLLQLIAGIIAFAVAILLIPLLRPDESDLFWMVFLVGLTLIFRAVSVVRYWYEAQVLSKYFVWLDNGL
FFVFSGVRILLILNGLGIFPFIWTGLIESSISLFGYSLLYKYHNGSLSVLHANWRRARTLLRDSWMLLLSGLAVIVYMRI
DQIMIGQMMGDEAVGIYTAAVKISEVWYFIPMAVASSIFPAILKAKEFSQELYLERLGLLHSFMFLLALMIAIPMTFLSD
PIIRLFFGEKFSEAGNVLAIHIWAGIFVFLGVASSRYYLTENLPKGELYKSISGCMTNIILNYFLIPLCGIKGAAIATVI
SQFVASTLFNLLFKRTREIFFIQLESVFFWKTLSRLNHLRSWLLKDG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51066; Mature: 51066

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKLYSRYPNLKDILYNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIA
CCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LIGSFTNLGLDGVVVRELIKEKAHKEEILSTSFLLQLIAGIIAFAVAILLIPLLRPDESD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LFWMVFLVGLTLIFRAVSVVRYWYEAQVLSKYFVWLDNGLFFVFSGVRILLILNGLGIFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
FIWTGLIESSISLFGYSLLYKYHNGSLSVLHANWRRARTLLRDSWMLLLSGLAVIVYMRI
HHHHHHHHHHHHHHHHHHHHEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQIMIGQMMGDEAVGIYTAAVKISEVWYFIPMAVASSIFPAILKAKEFSQELYLERLGLL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSFMFLLALMIAIPMTFLSDPIIRLFFGEKFSEAGNVLAIHIWAGIFVFLGVASSRYYLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEE
ENLPKGELYKSISGCMTNIILNYFLIPLCGIKGAAIATVISQFVASTLFNLLFKRTREIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FIQLESVFFWKTLSRLNHLRSWLLKDG
EEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQKLYSRYPNLKDILYNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIA
CCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LIGSFTNLGLDGVVVRELIKEKAHKEEILSTSFLLQLIAGIIAFAVAILLIPLLRPDESD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LFWMVFLVGLTLIFRAVSVVRYWYEAQVLSKYFVWLDNGLFFVFSGVRILLILNGLGIFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
FIWTGLIESSISLFGYSLLYKYHNGSLSVLHANWRRARTLLRDSWMLLLSGLAVIVYMRI
HHHHHHHHHHHHHHHHHHHHEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQIMIGQMMGDEAVGIYTAAVKISEVWYFIPMAVASSIFPAILKAKEFSQELYLERLGLL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSFMFLLALMIAIPMTFLSDPIIRLFFGEKFSEAGNVLAIHIWAGIFVFLGVASSRYYLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEE
ENLPKGELYKSISGCMTNIILNYFLIPLCGIKGAAIATVISQFVASTLFNLLFKRTREIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FIQLESVFFWKTLSRLNHLRSWLLKDG
EEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA