| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116327936
Identifier: 116327936
GI number: 116327936
Start: 1438005
End: 1439306
Strand: Direct
Name: 116327936
Synonym: LBL_1222
Alternate gene names: NA
Gene position: 1438005-1439306 (Clockwise)
Preceding gene: 116327935
Following gene: 116327937
Centisome position: 39.78
GC content: 31.8
Gene sequence:
>1302_bases ATGTCGCTTATTATATTTGTGTTTGGCGTTTTAAATTTGGCGTTTTCTTATCTGTTCTTGAAAAAGACAAGCTGGATTCT TCTTTTAATTCAAGCTTATTGGTTTTTTTGGATGTTTTTGTCTTCGTTCTCTTTAACTGGACTTTTTATTCCTTCTGATT ATACATATTCTCTTTACATTATGCTTTTATCTTCGGTGACAGCGGGAGCTGGTGTTGCGAAATTTTGGGATATAAAGACA CAAAATAAAACTCGTCTTATGCCTCATTCTTTTTTTGGTCTGCTCATTAAAGATAAAGAGAAATATTATTTTTACTTTAT TCTGATTTTCATATTTCCGATCGTTTTGTTTTTTTTATCAAAATCAATTTATATTAACCTGAAGCCAGATGCAATGTATC CGTCCGCGTTTAGAACTTCTGCATATGGAGTTTACGGCGAGTCTATTTTGTTTGGGAAGAATAAATACTTATATTATTAT TCTTTAGTAGTAACTCCAATTATTTTTGCATCTTTGTTCTTAGGCGCGACGTTTTATTTACGATTAAAAAAAATGCGAGT TTTGATTTTAGGCGCGATTCTTACGATAATGGAAACATTGATGTTTTTGGGTCGCTTTGGGTTTTATTACGTTCTTATTG TTCTAATTCTGGTTTTAGTGATTAAAGTTTTTAGAAATCATAAAAGCTTCTTGAACTCTATCAGTTTAATTCATATTTTC ATTGCTACATGCATATTGCTTGGAGTTTTTTTTATTAGCGCTATAAGAAATTCGAATTGGCAATTTGATTTCCGCGAATT TTTAAATATCTACATTATCGATTATCACACAGAGTCCTTTTCCATATTCGATAGTGAGTTGAAGGACGCAAAATCACTGT TACATGAGAGAACGTATGGAAGAGCTTCATTGGGTACTCTAGAAAGTAGCTTTTCAGTTGCCTTAGCATTTTTTCGTATA CCACTACATATACAAGTACAGAGTGATTTGATTGGAGGGTATTTAAATAAAAACAGGATTATAGGATACTCGAAAGACGG AAGACCTAAAGAATATAATGCCTTCGGCTCTGTACTTTTCACTCTTTATAAGGATGGGGGAATTCCTTTTATTATTGGGA TGGGAATTCTCTTTGGATTTTGCGTAGCCAAATTTTCAAAATCATTTATTTCGCTTAATCCATATTATATTTCTCTTTTG GGTTCTTTATTTTTTGTCGGAATTTTTGGTATTTTTAAACCTGTAATGGCAGAGCAGATTACTCAAACTATATTCATATT ATGGTTCATTTGGCTTATTTGA
Upstream 100 bases:
>100_bases ATATGTTGGTCACGTTTAAAACCGTTAAGACGATTTTGACGGGCTTTGGAGCTAGGTAGAAAGTTAAAGATAAAATATTG AATTAGGTACGATTAAATCG
Downstream 100 bases:
>100_bases ATTAAAGCGTTCAACAAAAACTAAGAGCATGTATCAAAACTTCGAATTAAAAGTAATAATCGAGCTTGCAAGATAAAAAG ATGCTAGATAATTTTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSLIIFVFGVLNLAFSYLFLKKTSWILLLIQAYWFFWMFLSSFSLTGLFIPSDYTYSLYIMLLSSVTAGAGVAKFWDIKT QNKTRLMPHSFFGLLIKDKEKYYFYFILIFIFPIVLFFLSKSIYINLKPDAMYPSAFRTSAYGVYGESILFGKNKYLYYY SLVVTPIIFASLFLGATFYLRLKKMRVLILGAILTIMETLMFLGRFGFYYVLIVLILVLVIKVFRNHKSFLNSISLIHIF IATCILLGVFFISAIRNSNWQFDFREFLNIYIIDYHTESFSIFDSELKDAKSLLHERTYGRASLGTLESSFSVALAFFRI PLHIQVQSDLIGGYLNKNRIIGYSKDGRPKEYNAFGSVLFTLYKDGGIPFIIGMGILFGFCVAKFSKSFISLNPYYISLL GSLFFVGIFGIFKPVMAEQITQTIFILWFIWLI
Sequences:
>Translated_433_residues MSLIIFVFGVLNLAFSYLFLKKTSWILLLIQAYWFFWMFLSSFSLTGLFIPSDYTYSLYIMLLSSVTAGAGVAKFWDIKT QNKTRLMPHSFFGLLIKDKEKYYFYFILIFIFPIVLFFLSKSIYINLKPDAMYPSAFRTSAYGVYGESILFGKNKYLYYY SLVVTPIIFASLFLGATFYLRLKKMRVLILGAILTIMETLMFLGRFGFYYVLIVLILVLVIKVFRNHKSFLNSISLIHIF IATCILLGVFFISAIRNSNWQFDFREFLNIYIIDYHTESFSIFDSELKDAKSLLHERTYGRASLGTLESSFSVALAFFRI PLHIQVQSDLIGGYLNKNRIIGYSKDGRPKEYNAFGSVLFTLYKDGGIPFIIGMGILFGFCVAKFSKSFISLNPYYISLL GSLFFVGIFGIFKPVMAEQITQTIFILWFIWLI >Mature_432_residues SLIIFVFGVLNLAFSYLFLKKTSWILLLIQAYWFFWMFLSSFSLTGLFIPSDYTYSLYIMLLSSVTAGAGVAKFWDIKTQ NKTRLMPHSFFGLLIKDKEKYYFYFILIFIFPIVLFFLSKSIYINLKPDAMYPSAFRTSAYGVYGESILFGKNKYLYYYS LVVTPIIFASLFLGATFYLRLKKMRVLILGAILTIMETLMFLGRFGFYYVLIVLILVLVIKVFRNHKSFLNSISLIHIFI ATCILLGVFFISAIRNSNWQFDFREFLNIYIIDYHTESFSIFDSELKDAKSLLHERTYGRASLGTLESSFSVALAFFRIP LHIQVQSDLIGGYLNKNRIIGYSKDGRPKEYNAFGSVLFTLYKDGGIPFIIGMGILFGFCVAKFSKSFISLNPYYISLLG SLFFVGIFGIFKPVMAEQITQTIFILWFIWLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50116; Mature: 49985
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIIFVFGVLNLAFSYLFLKKTSWILLLIQAYWFFWMFLSSFSLTGLFIPSDYTYSLYI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH MLLSSVTAGAGVAKFWDIKTQNKTRLMPHSFFGLLIKDKEKYYFYFILIFIFPIVLFFLS HHHHHHCCCCCHHHHEECCCCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHC KSIYINLKPDAMYPSAFRTSAYGVYGESILFGKNKYLYYYSLVVTPIIFASLFLGATFYL CCEEEEECCCCCCCCHHHCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHH RLKKMRVLILGAILTIMETLMFLGRFGFYYVLIVLILVLVIKVFRNHKSFLNSISLIHIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATCILLGVFFISAIRNSNWQFDFREFLNIYIIDYHTESFSIFDSELKDAKSLLHERTYG HHHHHHHHHHHHHHHHCCCCCEEHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC RASLGTLESSFSVALAFFRIPLHIQVQSDLIGGYLNKNRIIGYSKDGRPKEYNAFGSVLF CCHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHH TLYKDGGIPFIIGMGILFGFCVAKFSKSFISLNPYYISLLGSLFFVGIFGIFKPVMAEQI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTIFILWFIWLI HHHHHHHHHHHHC >Mature Secondary Structure SLIIFVFGVLNLAFSYLFLKKTSWILLLIQAYWFFWMFLSSFSLTGLFIPSDYTYSLYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH MLLSSVTAGAGVAKFWDIKTQNKTRLMPHSFFGLLIKDKEKYYFYFILIFIFPIVLFFLS HHHHHHCCCCCHHHHEECCCCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHC KSIYINLKPDAMYPSAFRTSAYGVYGESILFGKNKYLYYYSLVVTPIIFASLFLGATFYL CCEEEEECCCCCCCCHHHCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHH RLKKMRVLILGAILTIMETLMFLGRFGFYYVLIVLILVLVIKVFRNHKSFLNSISLIHIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATCILLGVFFISAIRNSNWQFDFREFLNIYIIDYHTESFSIFDSELKDAKSLLHERTYG HHHHHHHHHHHHHHHHCCCCCEEHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC RASLGTLESSFSVALAFFRIPLHIQVQSDLIGGYLNKNRIIGYSKDGRPKEYNAFGSVLF CCHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHH TLYKDGGIPFIIGMGILFGFCVAKFSKSFISLNPYYISLLGSLFFVGIFGIFKPVMAEQI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTIFILWFIWLI HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA