| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327922
Identifier: 116327922
GI number: 116327922
Start: 1423284
End: 1425176
Strand: Direct
Name: 116327922
Synonym: LBL_1208
Alternate gene names: NA
Gene position: 1423284-1425176 (Clockwise)
Preceding gene: 116327921
Following gene: 116327923
Centisome position: 39.38
GC content: 35.82
Gene sequence:
>1893_bases TTGTCTAACCGAGGCTCAAATCAAAATTCTATCTTAGTCTGGGATCATTCAAGGGATCTACCTGATTTTTCTGGTAGTAT CTATCTTTGGAGAGATTATTCAGAAGATCTTTCTAAAAATCAATTTTCGATTCCAAAATATATCGATCAAAACCGAGTTC GACTGAGAGAACAGTATAATTCTCTCCTTTATCGGTTTGGAGAAGTTCGACTTAGAAATAAAAGAGTTGTTGATTGGTTA CAAATTCGCCCTGGTCTTAGTTACTGGTGGATGACGTTAATTGTGGAAAGCAATTACGGGAAATCTTCCTTTATGACTTC TTTTATAAAGTTACTTGCTTTTGAAGAAATTCTATCGACGCAGAATGTTTCAGAGATTATTTTCGCTTCTTCTGATTGTA ATTTAAAGAAAATAATTCTTAAATTTTGTAAGGAAAACAAGATTCGATTTTCCCAACAAAATGGAATCAAAGATTACAAT AACTGTATTAATCCATTCTGGATCTTTTATAAACGATTGCCTTATATTTTCAGAGCTAGTATTGCATTCCTTCGTTATTT GCATTTGGTTTGGGGGTTGCGAAAACAGAAGAACGGCTTCGAAAAAAGAATAAAAAACTCTCAAATTTCTATCTTTGATT ATTTTTTTCATCTGAGATTTAGCGATCCTAAAGAGAACGTTTCATTTGGGTCGGACTACTGGACGAATCTTGTTGATGTG TTGAGGAATTCGAAAGTAAAAACACTCTGGTATCATCTATTCATTCCTCATGGCCAAGTCCCGAATTCAAAGAAGGCGAT TTCTTTAGCCCAAACTTTCAATCAAAATGAGAATGAAGTTCATCACTTTTTAGAAGGGCGAGTTGGTCTTTCTGTCATTC TAAAAATGATTTTGGACTATATTAGAATCTCTTGGATTCGATTTGTTATACGCCATTTTAGATTATTTTGTAGAACGAAT ACTTTGGCTTTTGATCTATGGCCTTTAATTCGTGGTGATTTTTTAGATTCATTGAGCGGATCGACTTCGGTTCAAAATCT TTTTTTTCTCAATTTAATCGAAGAAAATTTGCAAGATCTGCCCCCCAAAAAACTTGGGATTTATCTTCAGGAAAATCAGG CTTGGGAGATGGCTCTGATTTATGCCTGGAAATCCAAAGGAAACGGGCCTTTGATTGGAGTTCCTCATGCAACGGTACGA TTTTGGGATCTTCGATATTTTCGTGATCCAAGAAGTTATATTCGAAAAGGTGAAAATTCTTGGCCGATGCCAGATGTGGT TGCAGTCAATGGGAACGCTTCTTGGAATGCGTATCGAGAGGGGAAATTTCCAGAAGATCGAATGACAGAAGTAGAAGCAT TGCGTTATCTAAAAATCGACTCTAAAATTGCTGGTAGGAAAAATCCACCTCGAATGTCTTCTTCGAAAGTAAAAGTTCTC ATTTTAACGGATTATGTAGAGTCAGTCACAAAATTACAAATGCAAATGTTGGTTAATGCAATTCCATTTTTGAATCGAGA CTATACATTTATTCTAAAATCTCATCCTGCTTGCCCGATTCGAGAAGACGAATTTCCTTCTTTGCAGCTAATGGTTCGTC ATGAACCAATTACGGATTTATTAGAGGAAGTGGATATTGCTTATACGAGCAATATCACTTCTGCAGCGATTGACGTTTAT TGTTCTGGAGTTCCCGTGGTTTCCGTGTTAGATGGGACTTCTTTGAATATGAGTCCTCTTCTTGGTGTGAATGACGTTGT TTTTGTTTCTACCGCAAATGAATTATCGAACGCGTTAGAGAGTGGCTTCGACGTATTAGTAAAAAAAGAAAACTCTTTAT TTTGTATAGATCCAAATTTGCCCAAATGGAAAAAACTTTTGGCAATTGATTGA
Upstream 100 bases:
>100_bases AGGCTTTTAATGGAAAAAGGTTCAGCGGAAGAGGTGGTTCGTTTTTTTCAAGGTCAGAGTCTACTTAATCCGGTGCCAGA AGAAGAATATCAGAATCAAA
Downstream 100 bases:
>100_bases GGTTAGGAAAAATTTTAATTATATGACTAAAATCAGATTATGAAAGATATCATAGTAAGCATTGTGATTCCAACTTACAA TAGGGCAAATGATTTAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MSNRGSNQNSILVWDHSRDLPDFSGSIYLWRDYSEDLSKNQFSIPKYIDQNRVRLREQYNSLLYRFGEVRLRNKRVVDWL QIRPGLSYWWMTLIVESNYGKSSFMTSFIKLLAFEEILSTQNVSEIIFASSDCNLKKIILKFCKENKIRFSQQNGIKDYN NCINPFWIFYKRLPYIFRASIAFLRYLHLVWGLRKQKNGFEKRIKNSQISIFDYFFHLRFSDPKENVSFGSDYWTNLVDV LRNSKVKTLWYHLFIPHGQVPNSKKAISLAQTFNQNENEVHHFLEGRVGLSVILKMILDYIRISWIRFVIRHFRLFCRTN TLAFDLWPLIRGDFLDSLSGSTSVQNLFFLNLIEENLQDLPPKKLGIYLQENQAWEMALIYAWKSKGNGPLIGVPHATVR FWDLRYFRDPRSYIRKGENSWPMPDVVAVNGNASWNAYREGKFPEDRMTEVEALRYLKIDSKIAGRKNPPRMSSSKVKVL ILTDYVESVTKLQMQMLVNAIPFLNRDYTFILKSHPACPIREDEFPSLQLMVRHEPITDLLEEVDIAYTSNITSAAIDVY CSGVPVVSVLDGTSLNMSPLLGVNDVVFVSTANELSNALESGFDVLVKKENSLFCIDPNLPKWKKLLAID
Sequences:
>Translated_630_residues MSNRGSNQNSILVWDHSRDLPDFSGSIYLWRDYSEDLSKNQFSIPKYIDQNRVRLREQYNSLLYRFGEVRLRNKRVVDWL QIRPGLSYWWMTLIVESNYGKSSFMTSFIKLLAFEEILSTQNVSEIIFASSDCNLKKIILKFCKENKIRFSQQNGIKDYN NCINPFWIFYKRLPYIFRASIAFLRYLHLVWGLRKQKNGFEKRIKNSQISIFDYFFHLRFSDPKENVSFGSDYWTNLVDV LRNSKVKTLWYHLFIPHGQVPNSKKAISLAQTFNQNENEVHHFLEGRVGLSVILKMILDYIRISWIRFVIRHFRLFCRTN TLAFDLWPLIRGDFLDSLSGSTSVQNLFFLNLIEENLQDLPPKKLGIYLQENQAWEMALIYAWKSKGNGPLIGVPHATVR FWDLRYFRDPRSYIRKGENSWPMPDVVAVNGNASWNAYREGKFPEDRMTEVEALRYLKIDSKIAGRKNPPRMSSSKVKVL ILTDYVESVTKLQMQMLVNAIPFLNRDYTFILKSHPACPIREDEFPSLQLMVRHEPITDLLEEVDIAYTSNITSAAIDVY CSGVPVVSVLDGTSLNMSPLLGVNDVVFVSTANELSNALESGFDVLVKKENSLFCIDPNLPKWKKLLAID >Mature_629_residues SNRGSNQNSILVWDHSRDLPDFSGSIYLWRDYSEDLSKNQFSIPKYIDQNRVRLREQYNSLLYRFGEVRLRNKRVVDWLQ IRPGLSYWWMTLIVESNYGKSSFMTSFIKLLAFEEILSTQNVSEIIFASSDCNLKKIILKFCKENKIRFSQQNGIKDYNN CINPFWIFYKRLPYIFRASIAFLRYLHLVWGLRKQKNGFEKRIKNSQISIFDYFFHLRFSDPKENVSFGSDYWTNLVDVL RNSKVKTLWYHLFIPHGQVPNSKKAISLAQTFNQNENEVHHFLEGRVGLSVILKMILDYIRISWIRFVIRHFRLFCRTNT LAFDLWPLIRGDFLDSLSGSTSVQNLFFLNLIEENLQDLPPKKLGIYLQENQAWEMALIYAWKSKGNGPLIGVPHATVRF WDLRYFRDPRSYIRKGENSWPMPDVVAVNGNASWNAYREGKFPEDRMTEVEALRYLKIDSKIAGRKNPPRMSSSKVKVLI LTDYVESVTKLQMQMLVNAIPFLNRDYTFILKSHPACPIREDEFPSLQLMVRHEPITDLLEEVDIAYTSNITSAAIDVYC SGVPVVSVLDGTSLNMSPLLGVNDVVFVSTANELSNALESGFDVLVKKENSLFCIDPNLPKWKKLLAID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73488; Mature: 73356
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRGSNQNSILVWDHSRDLPDFSGSIYLWRDYSEDLSKNQFSIPKYIDQNRVRLREQYN CCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHH SLLYRFGEVRLRNKRVVDWLQIRPGLSYWWMTLIVESNYGKSSFMTSFIKLLAFEEILST HHHHHHHHHEECCCHHEEHEEECCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC QNVSEIIFASSDCNLKKIILKFCKENKIRFSQQNGIKDYNNCINPFWIFYKRLPYIFRAS CCCHHEEEECCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHH IAFLRYLHLVWGLRKQKNGFEKRIKNSQISIFDYFFHLRFSDPKENVSFGSDYWTNLVDV HHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH LRNSKVKTLWYHLFIPHGQVPNSKKAISLAQTFNQNENEVHHFLEGRVGLSVILKMILDY HHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH IRISWIRFVIRHFRLFCRTNTLAFDLWPLIRGDFLDSLSGSTSVQNLFFLNLIEENLQDL HHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC PPKKLGIYLQENQAWEMALIYAWKSKGNGPLIGVPHATVRFWDLRYFRDPRSYIRKGENS CCHHEEEEEECCCCEEEEEEEEEECCCCCCEEECCCCEEEEEEHHHHCCCHHHHHCCCCC WPMPDVVAVNGNASWNAYREGKFPEDRMTEVEALRYLKIDSKIAGRKNPPRMSSSKVKVL CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCHHCCCCCCCCCCCCCEEEE ILTDYVESVTKLQMQMLVNAIPFLNRDYTFILKSHPACPIREDEFPSLQLMVRHEPITDL EEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHH LEEVDIAYTSNITSAAIDVYCSGVPVVSVLDGTSLNMSPLLGVNDVVFVSTANELSNALE HHHHCHHHCCCCHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHH SGFDVLVKKENSLFCIDPNLPKWKKLLAID CCCEEEEEECCCEEEECCCCCHHHHHHCCC >Mature Secondary Structure SNRGSNQNSILVWDHSRDLPDFSGSIYLWRDYSEDLSKNQFSIPKYIDQNRVRLREQYN CCCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHH SLLYRFGEVRLRNKRVVDWLQIRPGLSYWWMTLIVESNYGKSSFMTSFIKLLAFEEILST HHHHHHHHHEECCCHHEEHEEECCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC QNVSEIIFASSDCNLKKIILKFCKENKIRFSQQNGIKDYNNCINPFWIFYKRLPYIFRAS CCCHHEEEECCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHH IAFLRYLHLVWGLRKQKNGFEKRIKNSQISIFDYFFHLRFSDPKENVSFGSDYWTNLVDV HHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH LRNSKVKTLWYHLFIPHGQVPNSKKAISLAQTFNQNENEVHHFLEGRVGLSVILKMILDY HHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH IRISWIRFVIRHFRLFCRTNTLAFDLWPLIRGDFLDSLSGSTSVQNLFFLNLIEENLQDL HHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC PPKKLGIYLQENQAWEMALIYAWKSKGNGPLIGVPHATVRFWDLRYFRDPRSYIRKGENS CCHHEEEEEECCCCEEEEEEEEEECCCCCCEEECCCCEEEEEEHHHHCCCHHHHHCCCCC WPMPDVVAVNGNASWNAYREGKFPEDRMTEVEALRYLKIDSKIAGRKNPPRMSSSKVKVL CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCHHCCCCCCCCCCCCCEEEE ILTDYVESVTKLQMQMLVNAIPFLNRDYTFILKSHPACPIREDEFPSLQLMVRHEPITDL EEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHH LEEVDIAYTSNITSAAIDVYCSGVPVVSVLDGTSLNMSPLLGVNDVVFVSTANELSNALE HHHHCHHHCCCCHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHH SGFDVLVKKENSLFCIDPNLPKWKKLLAID CCCEEEEEECCCEEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA