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The map label for this gene is ycjS [C]

Identifier: 116327894

GI number: 116327894

Start: 1392987

End: 1394075

Strand: Direct

Name: ycjS [C]

Synonym: LBL_1179

Alternate gene names: 116327894

Gene position: 1392987-1394075 (Clockwise)

Preceding gene: 116327893

Following gene: 116327895

Centisome position: 38.54

GC content: 31.77

Gene sequence:

>1089_bases
ATGAGTTTAAGATTAAGAACTGCATTAATCGGTTGTGGAAGAATTGGAGCTTTTACTTCCCTTGAGTTAAAAAAAAGTTT
GCCTATCGGTTGGTTACCCTATAATCATTTAGATTCTATATTATTGAATAAAGATTTATTTGATTTAATTGGTTTCTGTG
ACATTAAATTGGCAAACCTAGAGTTTCTTAGGAAAAAATTTAAAGATAAACAATTTTATACTGATTATAGGGCTCTAATA
GACGAACAAAAACCCGAAGTAGTTAGTATAGCTACAAGAGCTCAAGATAGATCGGAAATTATCGAATACGCTTGCAAAAA
TGGTGTAAAAGGTTTGTATATTGAAAAGCCTGCCGCACGTTCTTTAAAAGAATTAAAGATAATAAAAGATTCGATTATAA
GAAATCAGGTGAATTTTGTTTATGGTGTACAGCGAAGATTTATGGATTTATATATAAAAGCGAAAACAAAAATAGATGAA
GGTATTATCGGTGAAATTAACGAAGTTCACATAGGTTTTGGTAGATCTCCTTTGTTATGGGTGCATCCTCATTCTGTAGA
TATGATTTTATACTTTATTGGTTCGACCGAGATTGACTATGTTCAAGGTTCTTGTGAGATTGCGAAAGAAGTGGTCAAAA
AAGATTTCGTAGACTCAGATCCAATTTTAAATTTTGGATTCGTAAGATTTAAAAATGGGTCAACCGGTGTTATTTCTTCT
CAAACTTCTATTAATGGAATGAATGCTTCTATTGCTGGATCAGAAGGAATTATTCATATATTTGCAAATGGCAGTAAGAT
GGAAGTCCAATTAAAAAAGAAAATTAAAAATAGTAATTATTCGAAACTTTTATCCAAAGATTATTTTCCTTCAACTAAAA
CAAGTGGGACTTATGCTGCTTTCCGTCAATTGGGAAAATCAATTTATTCAAAGGACGTCTCCCCCTACAATATTCTTGAT
TTGGAAATTGGTCATCGAATGTTATTCGGCTTTGTCCAATCTAGCCTTAGAAATGGAGAGCGTGTTAGGCTAAATGATGT
AAATGAAAATTTATTTATTAGCGGAAGGCAAGGAAATTTGTATCCATAG

Upstream 100 bases:

>100_bases
TGATTCATAAAGAATATAGGTGGAAGGATATAGAAACTGCTTACAAGGATATGCTAGAAAGAAAACAACCCATTTATACT
TCTATCCTCAATTGGAAAAA

Downstream 100 bases:

>100_bases
GAAATGTTATGAAAAATGATAATGCAGATGCAACGGTGCAATTCTTTAAGTCCGTCGGAGTCGATTGGTTGGTGAATAAG
TCAGATGAAAAACATATGCA

Product: dehydrogenase

Products: NA

Alternate protein names: Dehydrogenase; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide Biosynthesis Protein BplA; Oxidoreductase Domain Protein; GFO/IDH/MOCA Family Oxidoreductase

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSLRLRTALIGCGRIGAFTSLELKKSLPIGWLPYNHLDSILLNKDLFDLIGFCDIKLANLEFLRKKFKDKQFYTDYRALI
DEQKPEVVSIATRAQDRSEIIEYACKNGVKGLYIEKPAARSLKELKIIKDSIIRNQVNFVYGVQRRFMDLYIKAKTKIDE
GIIGEINEVHIGFGRSPLLWVHPHSVDMILYFIGSTEIDYVQGSCEIAKEVVKKDFVDSDPILNFGFVRFKNGSTGVISS
QTSINGMNASIAGSEGIIHIFANGSKMEVQLKKKIKNSNYSKLLSKDYFPSTKTSGTYAAFRQLGKSIYSKDVSPYNILD
LEIGHRMLFGFVQSSLRNGERVRLNDVNENLFISGRQGNLYP

Sequences:

>Translated_362_residues
MSLRLRTALIGCGRIGAFTSLELKKSLPIGWLPYNHLDSILLNKDLFDLIGFCDIKLANLEFLRKKFKDKQFYTDYRALI
DEQKPEVVSIATRAQDRSEIIEYACKNGVKGLYIEKPAARSLKELKIIKDSIIRNQVNFVYGVQRRFMDLYIKAKTKIDE
GIIGEINEVHIGFGRSPLLWVHPHSVDMILYFIGSTEIDYVQGSCEIAKEVVKKDFVDSDPILNFGFVRFKNGSTGVISS
QTSINGMNASIAGSEGIIHIFANGSKMEVQLKKKIKNSNYSKLLSKDYFPSTKTSGTYAAFRQLGKSIYSKDVSPYNILD
LEIGHRMLFGFVQSSLRNGERVRLNDVNENLFISGRQGNLYP
>Mature_361_residues
SLRLRTALIGCGRIGAFTSLELKKSLPIGWLPYNHLDSILLNKDLFDLIGFCDIKLANLEFLRKKFKDKQFYTDYRALID
EQKPEVVSIATRAQDRSEIIEYACKNGVKGLYIEKPAARSLKELKIIKDSIIRNQVNFVYGVQRRFMDLYIKAKTKIDEG
IIGEINEVHIGFGRSPLLWVHPHSVDMILYFIGSTEIDYVQGSCEIAKEVVKKDFVDSDPILNFGFVRFKNGSTGVISSQ
TSINGMNASIAGSEGIIHIFANGSKMEVQLKKKIKNSNYSKLLSKDYFPSTKTSGTYAAFRQLGKSIYSKDVSPYNILDL
EIGHRMLFGFVQSSLRNGERVRLNDVNENLFISGRQGNLYP

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40968; Mature: 40837

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRLRTALIGCGRIGAFTSLELKKSLPIGWLPYNHLDSILLNKDLFDLIGFCDIKLANL
CCEEEEEHHEECCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCEEEHHH
EFLRKKFKDKQFYTDYRALIDEQKPEVVSIATRAQDRSEIIEYACKNGVKGLYIEKPAAR
HHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHCCCHHHHHHHHHHCCCCEEEECCHHHH
SLKELKIIKDSIIRNQVNFVYGVQRRFMDLYIKAKTKIDEGIIGEINEVHIGFGRSPLLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCCEEE
VHPHSVDMILYFIGSTEIDYVQGSCEIAKEVVKKDFVDSDPILNFGFVRFKNGSTGVISS
ECCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCEEEC
QTSINGMNASIAGSEGIIHIFANGSKMEVQLKKKIKNSNYSKLLSKDYFPSTKTSGTYAA
CCCCCCCCCEECCCCCEEEEEECCCEEEEEEHHHHCCCCHHHHHHHCCCCCCCCCCHHHH
FRQLGKSIYSKDVSPYNILDLEIGHRMLFGFVQSSLRNGERVRLNDVNENLFISGRQGNL
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCC
YP
CC
>Mature Secondary Structure 
SLRLRTALIGCGRIGAFTSLELKKSLPIGWLPYNHLDSILLNKDLFDLIGFCDIKLANL
CEEEEEHHEECCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCEEEHHH
EFLRKKFKDKQFYTDYRALIDEQKPEVVSIATRAQDRSEIIEYACKNGVKGLYIEKPAAR
HHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHCCCHHHHHHHHHHCCCCEEEECCHHHH
SLKELKIIKDSIIRNQVNFVYGVQRRFMDLYIKAKTKIDEGIIGEINEVHIGFGRSPLLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCCEEE
VHPHSVDMILYFIGSTEIDYVQGSCEIAKEVVKKDFVDSDPILNFGFVRFKNGSTGVISS
ECCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCEEEC
QTSINGMNASIAGSEGIIHIFANGSKMEVQLKKKIKNSNYSKLLSKDYFPSTKTSGTYAA
CCCCCCCCCEECCCCCEEEEEECCCEEEEEEHHHHCCCCHHHHHHHCCCCCCCCCCHHHH
FRQLGKSIYSKDVSPYNILDLEIGHRMLFGFVQSSLRNGERVRLNDVNENLFISGRQGNL
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCC
YP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA