| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327439
Identifier: 116327439
GI number: 116327439
Start: 729885
End: 730994
Strand: Direct
Name: 116327439
Synonym: LBL_0655
Alternate gene names: NA
Gene position: 729885-730994 (Clockwise)
Preceding gene: 116327438
Following gene: 116327442
Centisome position: 20.19
GC content: 39.19
Gene sequence:
>1110_bases TTGGATCTATTCCGAGGAATGACCGTGGTCGGAATGATACTCGTAAATAATCCCGGTTCGTGGTCTTACGTTTATTCTCC TTTGAAACATGCCGAGTGGAACGGTTGTACCCCAACGGATTTGGTGTTTCCCTTTTTTTTATTCGCGGTGGGAGCGTCGA TTCCAATTTCATTATATTCTAAAAATGGAATTAATAGAATTCGAATCTGGATCGGAATTTGTATAAGAGGCATTAGTCTA ATATTACTCGGGCTGTTTTTGAATTTTTTCGGAGAATGGACTTTTTCGGAGCTTAGAATTCCCGGCGTCCTGCAAAGAAT CGGATTTGTGTATTGGGTCGTCGCAACTTTGTTCCTCGTATTTCCGGGAAAGAAAGTGCTTGTGTTTTTAATTCCGATTT TGCTCGTTCATACTTGGATCTTAACACACATCGCTCCTCCTGGAGAATCGATGGTGTCTTTAGAGCAGGGAAAGGACATC GGAGCCTGGATCGATCGAACGATTTTCGGAGAAAAACATCTTTGGAAATTTTCCAAAACCTGGGACCCGGAAGGATTTTT AAGTGGAATCGCGTCGATTGCCACTTCTTTGTTCGGAGTAATTTGTGGGTTTATCCTTTTTCGGAGAGAAGGTAGAGGAA AAAATAGGGTTCTAAGTATCTTCGGGTTGGGGTTTTTATTCACTTTCGTCGGTTTATTATGGGATCGAAGTTTACCGATG AATAAAAGTCTTTGGACCGGAAGTTACGCGGTATATACGACAGGTTTTGCTTTTTTGTGCATAGGATTTTTTGAATATTT AGATTCTTTAATTCTTTTGAAAAAGTGGAACGGTTTGGATTTGAAAATCTTTTTTCAACCGTTTTTTGTATTCGGTAAAA ATGCGATTTTAGTCTTTGTAGGTTCCGGAATTCTTGCGAGAACTCTCAATTTTTGGGCGATCGTGTTGGAGAATGGAAAA TCGGTCGGCGTCAAAGTTTGGTTTTTTTCTAAACTTGTTTTATTTGCAGATCCGTATCTTGCATCGTTATTGTACGCGGT TCTTCATTTGTCTGTTTGGTGGGGAATTTTAAGTTTCTTAGATAAAAGGAAAATCTATATCAAAGTTTAA
Upstream 100 bases:
>100_bases TGCGATAGGAAAACAGAGTTCTCACGAATAAAAAAACGAAAAGTTCAAAGGTCGTCTTTTGGAAAAAAAATCAACTCAAA ATAAGGATCGGATTTTATCT
Downstream 100 bases:
>100_bases AACGACTCCAGAAATCTTTGAAGAAATGATCTTTCTGATAAAGCAGAATTTGGTTTTGGGACGCACCGTACGTTTTTCTC TGTTCCTTTATTTTTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MDLFRGMTVVGMILVNNPGSWSYVYSPLKHAEWNGCTPTDLVFPFFLFAVGASIPISLYSKNGINRIRIWIGICIRGISL ILLGLFLNFFGEWTFSELRIPGVLQRIGFVYWVVATLFLVFPGKKVLVFLIPILLVHTWILTHIAPPGESMVSLEQGKDI GAWIDRTIFGEKHLWKFSKTWDPEGFLSGIASIATSLFGVICGFILFRREGRGKNRVLSIFGLGFLFTFVGLLWDRSLPM NKSLWTGSYAVYTTGFAFLCIGFFEYLDSLILLKKWNGLDLKIFFQPFFVFGKNAILVFVGSGILARTLNFWAIVLENGK SVGVKVWFFSKLVLFADPYLASLLYAVLHLSVWWGILSFLDKRKIYIKV
Sequences:
>Translated_369_residues MDLFRGMTVVGMILVNNPGSWSYVYSPLKHAEWNGCTPTDLVFPFFLFAVGASIPISLYSKNGINRIRIWIGICIRGISL ILLGLFLNFFGEWTFSELRIPGVLQRIGFVYWVVATLFLVFPGKKVLVFLIPILLVHTWILTHIAPPGESMVSLEQGKDI GAWIDRTIFGEKHLWKFSKTWDPEGFLSGIASIATSLFGVICGFILFRREGRGKNRVLSIFGLGFLFTFVGLLWDRSLPM NKSLWTGSYAVYTTGFAFLCIGFFEYLDSLILLKKWNGLDLKIFFQPFFVFGKNAILVFVGSGILARTLNFWAIVLENGK SVGVKVWFFSKLVLFADPYLASLLYAVLHLSVWWGILSFLDKRKIYIKV >Mature_369_residues MDLFRGMTVVGMILVNNPGSWSYVYSPLKHAEWNGCTPTDLVFPFFLFAVGASIPISLYSKNGINRIRIWIGICIRGISL ILLGLFLNFFGEWTFSELRIPGVLQRIGFVYWVVATLFLVFPGKKVLVFLIPILLVHTWILTHIAPPGESMVSLEQGKDI GAWIDRTIFGEKHLWKFSKTWDPEGFLSGIASIATSLFGVICGFILFRREGRGKNRVLSIFGLGFLFTFVGLLWDRSLPM NKSLWTGSYAVYTTGFAFLCIGFFEYLDSLILLKKWNGLDLKIFFQPFFVFGKNAILVFVGSGILARTLNFWAIVLENGK SVGVKVWFFSKLVLFADPYLASLLYAVLHLSVWWGILSFLDKRKIYIKV
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=367, Percent_Identity=31.6076294277929, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24639786, Length=421, Percent_Identity=28.5035629453682, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41872; Mature: 41872
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFRGMTVVGMILVNNPGSWSYVYSPLKHAEWNGCTPTDLVFPFFLFAVGASIPISLYS CCCHHCCCEEEEEEECCCCCCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEC KNGINRIRIWIGICIRGISLILLGLFLNFFGEWTFSELRIPGVLQRIGFVYWVVATLFLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH FPGKKVLVFLIPILLVHTWILTHIAPPGESMVSLEQGKDIGAWIDRTIFGEKHLWKFSKT CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHCCCCHHHHHHHHHCCCHHHEECCCC WDPEGFLSGIASIATSLFGVICGFILFRREGRGKNRVLSIFGLGFLFTFVGLLWDRSLPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC NKSLWTGSYAVYTTGFAFLCIGFFEYLDSLILLKKWNGLDLKIFFQPFFVFGKNAILVFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCEEEEEE GSGILARTLNFWAIVLENGKSVGVKVWFFSKLVLFADPYLASLLYAVLHLSVWWGILSFL CCCHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DKRKIYIKV CCCCEEEEC >Mature Secondary Structure MDLFRGMTVVGMILVNNPGSWSYVYSPLKHAEWNGCTPTDLVFPFFLFAVGASIPISLYS CCCHHCCCEEEEEEECCCCCCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEC KNGINRIRIWIGICIRGISLILLGLFLNFFGEWTFSELRIPGVLQRIGFVYWVVATLFLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH FPGKKVLVFLIPILLVHTWILTHIAPPGESMVSLEQGKDIGAWIDRTIFGEKHLWKFSKT CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHCCCCHHHHHHHHHCCCHHHEECCCC WDPEGFLSGIASIATSLFGVICGFILFRREGRGKNRVLSIFGLGFLFTFVGLLWDRSLPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC NKSLWTGSYAVYTTGFAFLCIGFFEYLDSLILLKKWNGLDLKIFFQPFFVFGKNAILVFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCEEEEEE GSGILARTLNFWAIVLENGKSVGVKVWFFSKLVLFADPYLASLLYAVLHLSVWWGILSFL CCCHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DKRKIYIKV CCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA