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The map label for this gene is sppA-3 [H]

Identifier: 116327402

GI number: 116327402

Start: 684376

End: 685329

Strand: Direct

Name: sppA-3 [H]

Synonym: LBL_0608

Alternate gene names: 116327402

Gene position: 684376-685329 (Clockwise)

Preceding gene: 116327400

Following gene: 116327403

Centisome position: 18.93

GC content: 43.5

Gene sequence:

>954_bases
GTGGAAAGAAACCGTTTAGCATTAGCAATCACATTCATATTAACCACTTTGTCCGTATTGATCGGACTTGTGAATATCTC
TTTATCGACTACGACTTCGAAATATTCTCGAGTCACAGGAGGAACCTTTTTTCGTACGGCCCCGATCGGCGCGGCGCTGA
TCAAGGTCGAAGGCGAGATCCATTCGGGACATTCTACCTTTGAATCCACAGGATCCGAAAGTATTCTTCAAAAGTTGAGA
GATATAGAACAAAACCCGAATATTAAAGGAATCTTAATTGAAATAAACTCGCCCGGAGGAACCGTCGGCGCCTCGCAGGA
AGTTTATAACGAGTTGATGCGACTACGAAAAACGAGAAAGATCGTAGTGTCCATGAAAGATATGGCCGCTTCCGGGGGAT
ATTATATCGCTTCTTCGGCGGATAAAATTTTCGCACTTTCCGGAACGATCACAGGATCGATAGGGGTGATTGCAATGGCT
CCGAATATCAAAGGGCTTTTGGATCGCTACGGAGTGAAGATGAGGACGTATAAGGAAGGAAAGTATAAGGACTCCTTATC
TTTATTTCGAGATTCCACGCCCGAAGAAGACGAGATGATTCAAAAGATGCTCTCCGATACGTATAACGAATTCGTTCAAG
ACGTTGCGAAAGGAAGAAACCAAACCGTGAAGTCGGTTCAAAACTTAGCGGAAGGAAGAATTTATTCCGGACAAGATGCG
TTTAGAAATAAACTCGTGGACGAAATCGGCGGAAGAAAGGAAGCCTTGGAGGAATTGTCCAGACTCTGTCAGTACGACGG
AGAAATTCCACTTTATGAAGAGGAAGAGTCCCCGTTTGACAGATTGTTTATGATGTTAGGATCCAAGATGAATTCTTTTT
CGAGCGAAAGAATTTTTTTCAGAGAGTTCAAAAATTCACCGGTACTCGTAATTCTTCCTCAGGCTATCAGGTAG

Upstream 100 bases:

>100_bases
CAAAGGATTTAGACTCGCTCGCGTCGCACTTTCCGCTACTATTCCTAATACTTTCTTATTTCATTTGACACCGTTTAGAG
GGAATAATCTGATTTCAAGA

Downstream 100 bases:

>100_bases
GGATCTCATTGAAAGATTTATTTAATTCCATATTAGGATTGTTGGAAGCCGCTATTTACGAGCCGATTCGATTGGAAACG
GCACTTGCGAATCTTTCCGA

Product: periplasmic serine protease

Products: NA

Alternate protein names: PF-associated peptidase; Periplasmic flagella-associated protein [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MERNRLALAITFILTTLSVLIGLVNISLSTTTSKYSRVTGGTFFRTAPIGAALIKVEGEIHSGHSTFESTGSESILQKLR
DIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVIAMA
PNIKGLLDRYGVKMRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDA
FRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNSFSSERIFFREFKNSPVLVILPQAIR

Sequences:

>Translated_317_residues
MERNRLALAITFILTTLSVLIGLVNISLSTTTSKYSRVTGGTFFRTAPIGAALIKVEGEIHSGHSTFESTGSESILQKLR
DIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVIAMA
PNIKGLLDRYGVKMRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDA
FRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNSFSSERIFFREFKNSPVLVILPQAIR
>Mature_317_residues
MERNRLALAITFILTTLSVLIGLVNISLSTTTSKYSRVTGGTFFRTAPIGAALIKVEGEIHSGHSTFESTGSESILQKLR
DIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVIAMA
PNIKGLLDRYGVKMRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDA
FRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNSFSSERIFFREFKNSPVLVILPQAIR

Specific function: Possible protease. May be involved in export of periplasmic flagella proteins [H]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S49 family [H]

Homologues:

Organism=Escherichia coli, GI1788064, Length=234, Percent_Identity=33.7606837606838, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1787527, Length=167, Percent_Identity=34.1317365269461, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002142 [H]

Pfam domain/function: PF01343 Peptidase_S49 [H]

EC number: 3.4.21.-

Molecular weight: Translated: 35279; Mature: 35279

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERNRLALAITFILTTLSVLIGLVNISLSTTTSKYSRVTGGTFFRTAPIGAALIKVEGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCEEEECCCCEEEEEEECCC
HSGHSTFESTGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRK
CCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
IVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEG
HHHHHHHHHCCCCEEEECCCCEEEEEECEEECCCEEEEECCCHHHHHHHHCCEEEEECCC
KYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCHHH
FRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNSFSSERIFF
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
REFKNSPVLVILPQAIR
HHHCCCCEEEECCCCCC
>Mature Secondary Structure
MERNRLALAITFILTTLSVLIGLVNISLSTTTSKYSRVTGGTFFRTAPIGAALIKVEGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCEEEECCCCEEEEEEECCC
HSGHSTFESTGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRK
CCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
IVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEG
HHHHHHHHHCCCCEEEECCCCEEEEEECEEECCCEEEEECCCHHHHHHHHCCEEEEECCC
KYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCHHH
FRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNSFSSERIFF
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
REFKNSPVLVILPQAIR
HHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7628708 [H]