| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327400
Identifier: 116327400
GI number: 116327400
Start: 678798
End: 680462
Strand: Direct
Name: 116327400
Synonym: LBL_0606
Alternate gene names: NA
Gene position: 678798-680462 (Clockwise)
Preceding gene: 116327398
Following gene: 116327402
Centisome position: 18.78
GC content: 42.64
Gene sequence:
>1665_bases ATGGAAAAGCAAAAAAAATGTAATAAAAGAAGTAGAAAGTTACAAATCGGTTTTCAGATTTTTGGTTTAATTTTATCCAT TGAAACCGGATTATTCGCTCAAGAAAAACCTACGGGTGGAGATTCTAAACCTCCTGAAAAAACGAAAAAAGAATTTTATG AGGACAATGATACCGGTTTGATTTATACAAAACCGGGTCCGAACCGAACTAAAATCGATTCTTTGGGGAAAGAAAATTAT CCGGAACGCAAGGACATGCAACTTCCGAATCATTTCAAACACAGGCCCGAAAATATAAATGAAGAGAAACTCGTGATTGC GGCAAGAACTCAGTTCCGCGGCGTCAGCGGGGATCGTCAATCCGCTTTTTCGGGGAACGAAGACTTTCATACCGTGGACG CGAACTTTAGACGACTCCGTCTCGGTTTCTTTTATCAAGGAGCGAAATGGTGGGGTTTTGCGACTCAACTTCGTTTGGAG AACGCTCTTAATAGCCAGTTTTTAAGAATCACGAAAAATAAAACTACGGGAGACGTTCAGGATGTCACGTTAAACGATGC TCGAGGTTTGATTCACGAGGCTGTGATTTGGGTGAACATTCCGATTCTCAGTTCTCGTGTTACTTTAGGACAGATCAACG TTCCGTTTAACAGAGAGTATATTCAAAGTTCCGCAAATTTCATTTCCTTGGAAAGATCGATTGTCACAAACATGCTTCCT CAGTTCGATACGGGTGCGATGATTGCAATCCATCCTCTTGAAGCGATCGATAAAAAATATACGCGATATTTGTCTCTTCA CGGTTTTATCGGGAACGGTCACGGTGGTGGTGGAGATTACGGTTACGGTAGAAGACAAGATAACACGGCCGCACGCCAGA ATCTTCCTCAATTGCTTGCTCCGATTTATTACGGAAGAGTTCAATACAACGTCTTCGGTGGTTTGATCAAAAAGGACAAG GATATTGGTTGGGTGGAAGGAGACGAGATCTTTCAAGACGATGCGAAATTATCTTTCGGGGCGGCCATGGCTCAGACGAC TCAACTCAAGACTTCTCAGCCGATTCCTATCGAGTTTCTTCTTAAGGATCAAACTCCGACTAGATTGGCGATTCAGCAAA CGACTCCCACCGGAGGAATCGATCCCACAGGACTTAAATCCGATTATCTTGCGGACAGAACGATCACAACTCCGGGGCGT CCAAATTTTGGAATCGTCGGTCATACATATGATATGACTTTTACTTGGAAGGGTTTTTATTTGAACGGAGCATGGAGTAA ATTTTCAGGTTCTGCGGCCAACCAAGTGACGAGTTATCACGGTACAATCGGTTATAATTTTCATCTCTACGATTCGAAAT ATATTATGCCCGTTTTCAAGGCCGAGTTTCTGAAAGGAGATTGGAACCAGAGTCAAATGTTCGAACCCGGAGAGGCTTAT TATATCTACTGGGCGGGAATCAACTTGATGGGAGATTATCATCTCTGTAAGGTTCAACTTTTTTATCAAGTCATTCATAC GAATACGGCTAAGCACTATTTTTGGAATACCACGGATAACCGCGACTCAAGAACGGTTTATCTTCAGTTCCAAGCAAACT TTTGGACCGGCACTTCTTCTCCGGAAAATGTTTCCGGCGGAGCGATTTATAGACAAGATTATTGA
Upstream 100 bases:
>100_bases TTTCTCATCTGATTGTAATGAGAATGAAATATAGATTTCAGTGGAATTACAAAAAAGCTCAAGCAGAGAAGGGGAAAAGG TTGTTAACCGACGTCTTGAA
Downstream 100 bases:
>100_bases TCCAAATCGTTAGGCAGGGATTGGTCCTAAAAAATTTCAGGAATGATCCAATCTCTGCATTTCCGTTGCGGAGTTCCTAT ATTTTTGTGAAACTCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MEKQKKCNKRSRKLQIGFQIFGLILSIETGLFAQEKPTGGDSKPPEKTKKEFYEDNDTGLIYTKPGPNRTKIDSLGKENY PERKDMQLPNHFKHRPENINEEKLVIAARTQFRGVSGDRQSAFSGNEDFHTVDANFRRLRLGFFYQGAKWWGFATQLRLE NALNSQFLRITKNKTTGDVQDVTLNDARGLIHEAVIWVNIPILSSRVTLGQINVPFNREYIQSSANFISLERSIVTNMLP QFDTGAMIAIHPLEAIDKKYTRYLSLHGFIGNGHGGGGDYGYGRRQDNTAARQNLPQLLAPIYYGRVQYNVFGGLIKKDK DIGWVEGDEIFQDDAKLSFGAAMAQTTQLKTSQPIPIEFLLKDQTPTRLAIQQTTPTGGIDPTGLKSDYLADRTITTPGR PNFGIVGHTYDMTFTWKGFYLNGAWSKFSGSAANQVTSYHGTIGYNFHLYDSKYIMPVFKAEFLKGDWNQSQMFEPGEAY YIYWAGINLMGDYHLCKVQLFYQVIHTNTAKHYFWNTTDNRDSRTVYLQFQANFWTGTSSPENVSGGAIYRQDY
Sequences:
>Translated_554_residues MEKQKKCNKRSRKLQIGFQIFGLILSIETGLFAQEKPTGGDSKPPEKTKKEFYEDNDTGLIYTKPGPNRTKIDSLGKENY PERKDMQLPNHFKHRPENINEEKLVIAARTQFRGVSGDRQSAFSGNEDFHTVDANFRRLRLGFFYQGAKWWGFATQLRLE NALNSQFLRITKNKTTGDVQDVTLNDARGLIHEAVIWVNIPILSSRVTLGQINVPFNREYIQSSANFISLERSIVTNMLP QFDTGAMIAIHPLEAIDKKYTRYLSLHGFIGNGHGGGGDYGYGRRQDNTAARQNLPQLLAPIYYGRVQYNVFGGLIKKDK DIGWVEGDEIFQDDAKLSFGAAMAQTTQLKTSQPIPIEFLLKDQTPTRLAIQQTTPTGGIDPTGLKSDYLADRTITTPGR PNFGIVGHTYDMTFTWKGFYLNGAWSKFSGSAANQVTSYHGTIGYNFHLYDSKYIMPVFKAEFLKGDWNQSQMFEPGEAY YIYWAGINLMGDYHLCKVQLFYQVIHTNTAKHYFWNTTDNRDSRTVYLQFQANFWTGTSSPENVSGGAIYRQDY >Mature_554_residues MEKQKKCNKRSRKLQIGFQIFGLILSIETGLFAQEKPTGGDSKPPEKTKKEFYEDNDTGLIYTKPGPNRTKIDSLGKENY PERKDMQLPNHFKHRPENINEEKLVIAARTQFRGVSGDRQSAFSGNEDFHTVDANFRRLRLGFFYQGAKWWGFATQLRLE NALNSQFLRITKNKTTGDVQDVTLNDARGLIHEAVIWVNIPILSSRVTLGQINVPFNREYIQSSANFISLERSIVTNMLP QFDTGAMIAIHPLEAIDKKYTRYLSLHGFIGNGHGGGGDYGYGRRQDNTAARQNLPQLLAPIYYGRVQYNVFGGLIKKDK DIGWVEGDEIFQDDAKLSFGAAMAQTTQLKTSQPIPIEFLLKDQTPTRLAIQQTTPTGGIDPTGLKSDYLADRTITTPGR PNFGIVGHTYDMTFTWKGFYLNGAWSKFSGSAANQVTSYHGTIGYNFHLYDSKYIMPVFKAEFLKGDWNQSQMFEPGEAY YIYWAGINLMGDYHLCKVQLFYQVIHTNTAKHYFWNTTDNRDSRTVYLQFQANFWTGTSSPENVSGGAIYRQDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63005; Mature: 63005
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQKKCNKRSRKLQIGFQIFGLILSIETGLFAQEKPTGGDSKPPEKTKKEFYEDNDTGL CCCHHHHHHHHCEEEEHHHHEEEHHHHCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCEE IYTKPGPNRTKIDSLGKENYPERKDMQLPNHFKHRPENINEEKLVIAARTQFRGVSGDRQ EEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECEECCCCCCCH SAFSGNEDFHTVDANFRRLRLGFFYQGAKWWGFATQLRLENALNSQFLRITKNKTTGDVQ HCCCCCCCEEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHCCEEEEEECCCCCCCEE DVTLNDARGLIHEAVIWVNIPILSSRVTLGQINVPFNREYIQSSANFISLERSIVTNMLP EEEECHHHHHHHEEEEEEEEEEEECEEEEEEEECCCCHHHHHCCCCEEEHHHHHHHHHCC QFDTGAMIAIHPLEAIDKKYTRYLSLHGFIGNGHGGGGDYGYGRRQDNTAARQNLPQLLA CCCCCCEEEEECHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH PIYYGRVQYNVFGGLIKKDKDIGWVEGDEIFQDDAKLSFGAAMAQTTQLKTSQPIPIEFL HHHHCEEEEEECCCEEECCCCCCCCCCCHHHCCCCCEEHHHHHHHHHCCCCCCCCCEEEE LKDQTPTRLAIQQTTPTGGIDPTGLKSDYLADRTITTPGRPNFGIVGHTYDMTFTWKGFY EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEEEEEEEEEE LNGAWSKFSGSAANQVTSYHGTIGYNFHLYDSKYIMPVFKAEFLKGDWNQSQMFEPGEAY EECCCCCCCCCHHHHEEEECCEEEEEEEEECCCEECHHHHHHHHCCCCCCCCCCCCCCEE YIYWAGINLMGDYHLCKVQLFYQVIHTNTAKHYFWNTTDNRDSRTVYLQFQANFWTGTSS EEEEECEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEEEEECCCCC PENVSGGAIYRQDY CCCCCCCEEEECCC >Mature Secondary Structure MEKQKKCNKRSRKLQIGFQIFGLILSIETGLFAQEKPTGGDSKPPEKTKKEFYEDNDTGL CCCHHHHHHHHCEEEEHHHHEEEHHHHCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCEE IYTKPGPNRTKIDSLGKENYPERKDMQLPNHFKHRPENINEEKLVIAARTQFRGVSGDRQ EEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECEECCCCCCCH SAFSGNEDFHTVDANFRRLRLGFFYQGAKWWGFATQLRLENALNSQFLRITKNKTTGDVQ HCCCCCCCEEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHCCEEEEEECCCCCCCEE DVTLNDARGLIHEAVIWVNIPILSSRVTLGQINVPFNREYIQSSANFISLERSIVTNMLP EEEECHHHHHHHEEEEEEEEEEEECEEEEEEEECCCCHHHHHCCCCEEEHHHHHHHHHCC QFDTGAMIAIHPLEAIDKKYTRYLSLHGFIGNGHGGGGDYGYGRRQDNTAARQNLPQLLA CCCCCCEEEEECHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH PIYYGRVQYNVFGGLIKKDKDIGWVEGDEIFQDDAKLSFGAAMAQTTQLKTSQPIPIEFL HHHHCEEEEEECCCEEECCCCCCCCCCCHHHCCCCCEEHHHHHHHHHCCCCCCCCCEEEE LKDQTPTRLAIQQTTPTGGIDPTGLKSDYLADRTITTPGRPNFGIVGHTYDMTFTWKGFY EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEEEEEEEEEE LNGAWSKFSGSAANQVTSYHGTIGYNFHLYDSKYIMPVFKAEFLKGDWNQSQMFEPGEAY EECCCCCCCCCHHHHEEEECCEEEEEEEEECCCEECHHHHHHHHCCCCCCCCCCCCCCEE YIYWAGINLMGDYHLCKVQLFYQVIHTNTAKHYFWNTTDNRDSRTVYLQFQANFWTGTSS EEEEECEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEEEEECCCCC PENVSGGAIYRQDY CCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA