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The map label for this gene is motA-2 [H]

Identifier: 116327382

GI number: 116327382

Start: 645309

End: 646043

Strand: Direct

Name: motA-2 [H]

Synonym: LBL_0581

Alternate gene names: 116327382

Gene position: 645309-646043 (Clockwise)

Preceding gene: 116327379

Following gene: 116327384

Centisome position: 17.85

GC content: 45.31

Gene sequence:

>735_bases
ATGAATCCCACTTTCATTGGTCTTTCTGTCGCTTTTTTATCCGTTTTGATTGCGATCTCTTTGGAAGGCGCGCATTTTCT
TTCCTTCTTCAAAATCTCCGCTCTTCTTCTAATCATCGGGGGAACTGCGGGCGCAACCTTTGCAAGTTTTTCCCTAGAAC
AAATCAAAGATCTCGTCTTGAATCTTCAGACCGCGGTTTTTCCAAGACGTAAACCTCCTCTTGGCGAACTCTTTTTGGAT
TTTGCGGAACAAGCTCGTAAAAACGGTCTACTTTCCCTGGAAGATAATCTTAAATCGATCCAAGATCCGTTTCTTCAAAG
AGGAATCCAACTGATTGTGGATGGAACCGATCCTCGCGCAGTGGAAGAAATTCTTTTTGAGTCCGCTCTCGCTATGGAAG
ACAAAGAAGCGAACTCTGCCAAGATCTTAGAAACTGCGGGAGGATTTTCTCCTACGGTGGGAATCATAGGAACCGTTATG
GGCCTCGTGGGAGTATTGGAAAATTTGGGCGCAGGCACACGGGCGCTCGGAGAAGGAATTGCTACCGCGTTCATTGCCAC
TTTTTACGGAATTACATTTGCAAATCTTCTCTTTTTTCCTCTTGCCAACCGAATCAGGTCTTGGTCTAAGGAACAATCGG
ATCGTAGGCAAGCGGTTATTCGGGGAGTTATCGCTCTTCAAAGCGGAGACAATCGCAGAATTCTTATGGAAAGGATGACT
CCGTTTATCGATTAA

Upstream 100 bases:

>100_bases
TTGGCGGTTTCTTACCAGGACGGATGTGACGATTCGCTGCTCTTTTTGATAAGACAGAATTTTCTTGTAAAAACCGATGA
TCGTAGGGACTCTTGCGGAA

Downstream 100 bases:

>100_bases
GAATTTTAGAATTTACTTATATTTTTCTCTGAAAATTGATCTCAAAAATTCGTGTCTCCAATCTATAGTGTTACCGATGT
GCCAGAATATACAAACTCGT

Product: endoflagellar motor protein

Products: NA

Alternate protein names: Chemotaxis protein MotA [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNPTFIGLSVAFLSVLIAISLEGAHFLSFFKISALLLIIGGTAGATFASFSLEQIKDLVLNLQTAVFPRRKPPLGELFLD
FAEQARKNGLLSLEDNLKSIQDPFLQRGIQLIVDGTDPRAVEEILFESALAMEDKEANSAKILETAGGFSPTVGIIGTVM
GLVGVLENLGAGTRALGEGIATAFIATFYGITFANLLFFPLANRIRSWSKEQSDRRQAVIRGVIALQSGDNRRILMERMT
PFID

Sequences:

>Translated_244_residues
MNPTFIGLSVAFLSVLIAISLEGAHFLSFFKISALLLIIGGTAGATFASFSLEQIKDLVLNLQTAVFPRRKPPLGELFLD
FAEQARKNGLLSLEDNLKSIQDPFLQRGIQLIVDGTDPRAVEEILFESALAMEDKEANSAKILETAGGFSPTVGIIGTVM
GLVGVLENLGAGTRALGEGIATAFIATFYGITFANLLFFPLANRIRSWSKEQSDRRQAVIRGVIALQSGDNRRILMERMT
PFID
>Mature_244_residues
MNPTFIGLSVAFLSVLIAISLEGAHFLSFFKISALLLIIGGTAGATFASFSLEQIKDLVLNLQTAVFPRRKPPLGELFLD
FAEQARKNGLLSLEDNLKSIQDPFLQRGIQLIVDGTDPRAVEEILFESALAMEDKEANSAKILETAGGFSPTVGIIGTVM
GLVGVLENLGAGTRALGEGIATAFIATFYGITFANLLFFPLANRIRSWSKEQSDRRQAVIRGVIALQSGDNRRILMERMT
PFID

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26464; Mature: 26464

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTFIGLSVAFLSVLIAISLEGAHFLSFFKISALLLIIGGTAGATFASFSLEQIKDLVL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NLQTAVFPRRKPPLGELFLDFAEQARKNGLLSLEDNLKSIQDPFLQRGIQLIVDGTDPRA
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCEEEEECCCHHH
VEEILFESALAMEDKEANSAKILETAGGFSPTVGIIGTVMGLVGVLENLGAGTRALGEGI
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ATAFIATFYGITFANLLFFPLANRIRSWSKEQSDRRQAVIRGVIALQSGDNRRILMERMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
PFID
CCCC
>Mature Secondary Structure
MNPTFIGLSVAFLSVLIAISLEGAHFLSFFKISALLLIIGGTAGATFASFSLEQIKDLVL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NLQTAVFPRRKPPLGELFLDFAEQARKNGLLSLEDNLKSIQDPFLQRGIQLIVDGTDPRA
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCEEEEECCCHHH
VEEILFESALAMEDKEANSAKILETAGGFSPTVGIIGTVMGLVGVLENLGAGTRALGEGI
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ATAFIATFYGITFANLLFFPLANRIRSWSKEQSDRRQAVIRGVIALQSGDNRRILMERMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
PFID
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]