| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116327379
Identifier: 116327379
GI number: 116327379
Start: 641516
End: 642091
Strand: Direct
Name: 116327379
Synonym: LBL_0577
Alternate gene names: NA
Gene position: 641516-642091 (Clockwise)
Preceding gene: 116327378
Following gene: 116327382
Centisome position: 17.75
GC content: 39.41
Gene sequence:
>576_bases ATGTTTAAAAACCTCTTTTTGAATTTCGCCTTATTTTCTCTTTCAATGTTTTTCTTCCGATGCGACCCGCCTAAAGAAAT TAGCGAAACGGAATTCAAGAATTTGATTCGTGAAGCGTCGGATTCATACGGCTCCAACGAATTCCGTTCCATCAAATATC TCGGAGTTGAAAATGAGAAAGCGGTTCTCAAGGTATCGACTCCCTCTGTAGCCGGCTCGAAACGAGACACGGAAGAATTC TTTTACGCGAAGGCAACTCCTTCCTTAATAATCTGGATCGACGAAAATTTATACAAAATCACGGTTCCTAATTTCAAGAA ACTTTATCACTATATCCAGCTTCAAGAAAACAAACAATTCGGATTCGGACGATGGACGATTCTTACGCGAGATCCATCGG GGAACGAACCAGGGGTAAAAGCAATTCGCATTACAAAAGATGAACGTACTGTTTTTATATTCTATCTCCGTTCCGAAGGG ATTCAATCTTTCTCTCTAAACATAAAACACGTTCCGAATCGGGACGATCTAAAATACAAAGAGTTGTGGCTTGAACTAAT GAATCATATTGAATAA
Upstream 100 bases:
>100_bases TTCAGATTCGTCAGGTTAAAACAAGACCTCCTCTTTTTATTGGAAAAATGATGGTTTCGAAAACCAGAAAAACGCTATAG GAGTATGACAGAAATCCGGT
Downstream 100 bases:
>100_bases TTCCGCTTGAACGGTAATCTCCTCGTTCAAGACTATAAATCTTATGTAGATGAATCCGTTTCCGACTTGCGATCTCTGAA ATAATTCGATCGGAGTTTCT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MFKNLFLNFALFSLSMFFFRCDPPKEISETEFKNLIREASDSYGSNEFRSIKYLGVENEKAVLKVSTPSVAGSKRDTEEF FYAKATPSLIIWIDENLYKITVPNFKKLYHYIQLQENKQFGFGRWTILTRDPSGNEPGVKAIRITKDERTVFIFYLRSEG IQSFSLNIKHVPNRDDLKYKELWLELMNHIE
Sequences:
>Translated_191_residues MFKNLFLNFALFSLSMFFFRCDPPKEISETEFKNLIREASDSYGSNEFRSIKYLGVENEKAVLKVSTPSVAGSKRDTEEF FYAKATPSLIIWIDENLYKITVPNFKKLYHYIQLQENKQFGFGRWTILTRDPSGNEPGVKAIRITKDERTVFIFYLRSEG IQSFSLNIKHVPNRDDLKYKELWLELMNHIE >Mature_191_residues MFKNLFLNFALFSLSMFFFRCDPPKEISETEFKNLIREASDSYGSNEFRSIKYLGVENEKAVLKVSTPSVAGSKRDTEEF FYAKATPSLIIWIDENLYKITVPNFKKLYHYIQLQENKQFGFGRWTILTRDPSGNEPGVKAIRITKDERTVFIFYLRSEG IQSFSLNIKHVPNRDDLKYKELWLELMNHIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22505; Mature: 22505
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNLFLNFALFSLSMFFFRCDPPKEISETEFKNLIREASDSYGSNEFRSIKYLGVENEK CCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC AVLKVSTPSVAGSKRDTEEFFYAKATPSLIIWIDENLYKITVPNFKKLYHYIQLQENKQF EEEEEECCCCCCCCCCCHHEEEEECCCEEEEEEECCEEEEECCCHHHHHHEEEEECCCCC GFGRWTILTRDPSGNEPGVKAIRITKDERTVFIFYLRSEGIQSFSLNIKHVPNRDDLKYK CCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHH ELWLELMNHIE HHHHHHHHHCC >Mature Secondary Structure MFKNLFLNFALFSLSMFFFRCDPPKEISETEFKNLIREASDSYGSNEFRSIKYLGVENEK CCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC AVLKVSTPSVAGSKRDTEEFFYAKATPSLIIWIDENLYKITVPNFKKLYHYIQLQENKQF EEEEEECCCCCCCCCCCHHEEEEECCCEEEEEEECCEEEEECCCHHHHHHEEEEECCCCC GFGRWTILTRDPSGNEPGVKAIRITKDERTVFIFYLRSEGIQSFSLNIKHVPNRDDLKYK CCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHH ELWLELMNHIE HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA